Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PIK3C2AO00443 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PIK3C2AO00443 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
PIK3C2AO00443 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.21■■□□□ 1.31
PIK3C2AO00443 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PIK3C2AO00443 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PIK3C2AO00443 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.2■■□□□ 1.3
PIK3C2AO00443 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 AP001059.3-201ENST00000619053 235 ntBASIC23.2■■□□□ 1.3
PIK3C2AO00443 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PIK3C2AO00443 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PIK3C2AO00443 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PIK3C2AO00443 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 CD99-202ENST00000381180 530 ntTSL 2 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 GREM1-201ENST00000560677 623 ntTSL 4 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 AC092364.2-202ENST00000597012 1073 ntBASIC23.19■■□□□ 1.3
PIK3C2AO00443 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.19■■□□□ 1.3
PIK3C2AO00443 AJ011932.1-201ENST00000621707 465 ntBASIC23.19■■□□□ 1.3
PIK3C2AO00443 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PIK3C2AO00443 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 BICD1-207ENST00000551848 1962 ntBASIC23.18■■□□□ 1.3
PIK3C2AO00443 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 AC104581.1-202ENST00000635932 2618 ntBASIC23.18■■□□□ 1.3
PIK3C2AO00443 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 AC243562.1-201ENST00000560672 389 ntBASIC23.18■■□□□ 1.3
PIK3C2AO00443 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 AL009183.1-201ENST00000603760 355 ntBASIC23.18■■□□□ 1.3
PIK3C2AO00443 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PIK3C2AO00443 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
PIK3C2AO00443 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 TFAMP1-201ENST00000412727 736 ntBASIC23.17■■□□□ 1.3
PIK3C2AO00443 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 CD7-202ENST00000578509 925 ntTSL 3 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PIK3C2AO00443 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC23.17■■□□□ 1.3
PIK3C2AO00443 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms