Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AC046185.3-201ENST00000623228 1824 ntBASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 KRT18P13-201ENST00000400056 1290 ntBASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 RPS15P9-201ENST00000494093 319 ntBASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 GPR89P-201ENST00000407924 1495 ntBASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.5■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ACTG1P4-201ENST00000425123 1122 ntBASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AC092865.5-201ENST00000545435 363 ntBASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AL353135.1-201ENST00000606729 504 ntBASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AL139327.4-201ENST00000612362 153 ntBASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AL805961.1-202ENST00000641562 540 ntBASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 BX842568.4-201ENST00000421222 227 ntBASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AC007967.2-201ENST00000432613 625 ntBASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 MIR4751-201ENST00000578027 74 ntBASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 AC008667.4-201ENST00000607370 168 ntBASIC17.48■□□□□ 0.39
C1QTNF3-AMACRE9PGA6 GPALPP1-207ENST00000611650 899 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms