Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 AC091607.1-201ENST00000490318 1060 ntBASIC14.1□□□□□ -0.15
SRRM4A7MD48 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 AC019129.2-201ENST00000609837 1235 ntBASIC14.1□□□□□ -0.15
SRRM4A7MD48 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRRM4A7MD48 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
SRRM4A7MD48 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 AC016734.2-201ENST00000624325 1377 ntBASIC14.09□□□□□ -0.15
SRRM4A7MD48 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 FAM210CP-201ENST00000445714 574 ntBASIC14.09□□□□□ -0.15
SRRM4A7MD48 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 AC109462.3-201ENST00000573934 613 ntBASIC14.09□□□□□ -0.15
SRRM4A7MD48 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 AC116353.5-201ENST00000638148 1699 ntBASIC14.09□□□□□ -0.15
SRRM4A7MD48 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.09□□□□□ -0.15
SRRM4A7MD48 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRRM4A7MD48 AL049757.1-201ENST00000616842 1596 ntBASIC14.09□□□□□ -0.15
SRRM4A7MD48 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SRRM4A7MD48 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SRRM4A7MD48 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SRRM4A7MD48 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SRRM4A7MD48 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SRRM4A7MD48 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.08□□□□□ -0.15
SRRM4A7MD48 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SRRM4A7MD48 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.08□□□□□ -0.16
SRRM4A7MD48 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms