Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01546A6NGU7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 PAUPAR-201ENST00000630360 2965 ntBASIC12.35□□□□□ -0.43
LINC01546A6NGU7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.35□□□□□ -0.43
LINC01546A6NGU7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 AL138781.1-201ENST00000566567 1274 ntBASIC12.35□□□□□ -0.43
LINC01546A6NGU7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 FAM45BP-202ENST00000592932 1624 ntBASIC12.35□□□□□ -0.43
LINC01546A6NGU7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01546A6NGU7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 EGFEM1P-202ENST00000431685 1563 ntBASIC12.34□□□□□ -0.43
LINC01546A6NGU7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01546A6NGU7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
LINC01546A6NGU7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LINC01546A6NGU7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms