Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV7S3A2A0A539 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 GUSBP12-201ENST00000513727 720 ntBASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 AL138831.2-201ENST00000606564 490 ntBASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 AL049757.1-201ENST00000616842 1596 ntBASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV7S3A2A0A539 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 PCDHA14-201ENST00000506751 2298 ntBASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 AC091607.1-201ENST00000490318 1060 ntBASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.77■□□□□ 0.44
TCRBV7S3A2A0A539 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms