Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 AL513210.1-201ENST00000629608 234 ntBASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CCDC187A0A096LP49 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC187A0A096LP49 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 AC093677.2-201ENST00000600169 1863 ntBASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 AC092902.6-201ENST00000641783 218 ntBASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC187A0A096LP49 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 REXO1L3P-201ENST00000622202 1288 ntBASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC187A0A096LP49 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms