Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LINC01558Q9Y6Z2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01558Q9Y6Z2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01558Q9Y6Z2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01558Q9Y6Z2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
LINC01558Q9Y6Z2 AL117328.2-201ENST00000624617 1940 ntBASIC12.77□□□□□ -0.37
LINC01558Q9Y6Z2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01558Q9Y6Z2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01558Q9Y6Z2 C1orf229-201ENST00000623686 2258 ntBASIC12.77□□□□□ -0.37
LINC01558Q9Y6Z2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01558Q9Y6Z2 DUSP8P5-201ENST00000422884 1815 ntBASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01558Q9Y6Z2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01558Q9Y6Z2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01558Q9Y6Z2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01558Q9Y6Z2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC01558Q9Y6Z2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01558Q9Y6Z2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01558Q9Y6Z2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01558Q9Y6Z2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 LINC00565-201ENST00000562710 2331 ntBASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01558Q9Y6Z2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01558Q9Y6Z2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01558Q9Y6Z2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01558Q9Y6Z2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LINC01558Q9Y6Z2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC01558Q9Y6Z2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01558Q9Y6Z2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 AC097639.1-201ENST00000565519 1891 ntBASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 RNF165-205ENST00000588679 2904 ntBASIC12.7□□□□□ -0.38
LINC01558Q9Y6Z2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms