Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA5Q9Y5H7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA5Q9Y5H7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PCDHA5Q9Y5H7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHA5Q9Y5H7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA5Q9Y5H7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA5Q9Y5H7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA5Q9Y5H7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA5Q9Y5H7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHA5Q9Y5H7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHA5Q9Y5H7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHA5Q9Y5H7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA5Q9Y5H7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA5Q9Y5H7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.27■■□□□ 1.96
PCDHA5Q9Y5H7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA5Q9Y5H7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA5Q9Y5H7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
PCDHA5Q9Y5H7 AL359258.2-201ENST00000564063 1566 ntBASIC27.26■■□□□ 1.96
PCDHA5Q9Y5H7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
PCDHA5Q9Y5H7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA5Q9Y5H7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.26■■□□□ 1.95
PCDHA5Q9Y5H7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.26■■□□□ 1.95
PCDHA5Q9Y5H7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
PCDHA5Q9Y5H7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA5Q9Y5H7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA5Q9Y5H7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA5Q9Y5H7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA5Q9Y5H7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHA5Q9Y5H7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA5Q9Y5H7 CR559946.2-201ENST00000623684 991 ntBASIC27.23■■□□□ 1.95
PCDHA5Q9Y5H7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA5Q9Y5H7 AL359504.2-201ENST00000605506 1601 ntBASIC27.23■■□□□ 1.95
PCDHA5Q9Y5H7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHA5Q9Y5H7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
PCDHA5Q9Y5H7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA5Q9Y5H7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA5Q9Y5H7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.21■■□□□ 1.95
PCDHA5Q9Y5H7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA5Q9Y5H7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
PCDHA5Q9Y5H7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA5Q9Y5H7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
PCDHA5Q9Y5H7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
PCDHA5Q9Y5H7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PCDHA5Q9Y5H7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHA5Q9Y5H7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.2■■□□□ 1.94
PCDHA5Q9Y5H7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA5Q9Y5H7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDHA5Q9Y5H7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDHA5Q9Y5H7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.19■■□□□ 1.94
PCDHA5Q9Y5H7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
PCDHA5Q9Y5H7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA5Q9Y5H7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
PCDHA5Q9Y5H7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA5Q9Y5H7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
PCDHA5Q9Y5H7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA5Q9Y5H7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA5Q9Y5H7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA5Q9Y5H7 AC096887.2-201ENST00000623443 1957 ntBASIC27.17■■□□□ 1.94
PCDHA5Q9Y5H7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDHA5Q9Y5H7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA5Q9Y5H7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA5Q9Y5H7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA5Q9Y5H7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
PCDHA5Q9Y5H7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA5Q9Y5H7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA5Q9Y5H7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PCDHA5Q9Y5H7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA5Q9Y5H7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
PCDHA5Q9Y5H7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA5Q9Y5H7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.14■■□□□ 1.94
PCDHA5Q9Y5H7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA5Q9Y5H7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.14■■□□□ 1.94
PCDHA5Q9Y5H7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA5Q9Y5H7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHA5Q9Y5H7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHA5Q9Y5H7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDHA5Q9Y5H7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
PCDHA5Q9Y5H7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.13■■□□□ 1.93
PCDHA5Q9Y5H7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
PCDHA5Q9Y5H7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA5Q9Y5H7 MIR3648-2-201ENST00000581792 180 ntBASIC27.12■■□□□ 1.93
PCDHA5Q9Y5H7 MIR3648-1-201ENST00000615959 180 ntBASIC27.12■■□□□ 1.93
PCDHA5Q9Y5H7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA5Q9Y5H7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA5Q9Y5H7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
PCDHA5Q9Y5H7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms