Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB6Q9Y5F9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB6Q9Y5F9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB6Q9Y5F9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PCDHGB6Q9Y5F9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB6Q9Y5F9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHGB6Q9Y5F9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB6Q9Y5F9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB6Q9Y5F9 AC007029.1-201ENST00000604183 313 ntBASIC22.84■■□□□ 1.25
PCDHGB6Q9Y5F9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGB6Q9Y5F9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB6Q9Y5F9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB6Q9Y5F9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDHGB6Q9Y5F9 AL359258.2-201ENST00000564063 1566 ntBASIC22.83■■□□□ 1.25
PCDHGB6Q9Y5F9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
PCDHGB6Q9Y5F9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGB6Q9Y5F9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB6Q9Y5F9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDHGB6Q9Y5F9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGB6Q9Y5F9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGB6Q9Y5F9 KRT18P60-201ENST00000312876 1297 ntBASIC22.81■■□□□ 1.24
PCDHGB6Q9Y5F9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGB6Q9Y5F9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB6Q9Y5F9 SMPD5-203ENST00000639008 1464 ntBASIC22.79■■□□□ 1.24
PCDHGB6Q9Y5F9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB6Q9Y5F9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB6Q9Y5F9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.79■■□□□ 1.24
PCDHGB6Q9Y5F9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PCDHGB6Q9Y5F9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDHGB6Q9Y5F9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB6Q9Y5F9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB6Q9Y5F9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PCDHGB6Q9Y5F9 TSPY13P-201ENST00000338964 914 ntBASIC22.78■■□□□ 1.24
PCDHGB6Q9Y5F9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGB6Q9Y5F9 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDHGB6Q9Y5F9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB6Q9Y5F9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 AC025884.2-201ENST00000553429 711 ntBASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDHGB6Q9Y5F9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGB6Q9Y5F9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PCDHGB6Q9Y5F9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB6Q9Y5F9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB6Q9Y5F9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGB6Q9Y5F9 AL033527.3-201ENST00000566366 1196 ntBASIC22.75■■□□□ 1.23
PCDHGB6Q9Y5F9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 ATP5G2P3-201ENST00000429083 425 ntBASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB6Q9Y5F9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB6Q9Y5F9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHGB6Q9Y5F9 AC004987.1-201ENST00000428627 508 ntBASIC22.72■■□□□ 1.23
PCDHGB6Q9Y5F9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PCDHGB6Q9Y5F9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGB6Q9Y5F9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGB6Q9Y5F9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGB6Q9Y5F9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGB6Q9Y5F9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGB6Q9Y5F9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB6Q9Y5F9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGB6Q9Y5F9 AC133552.2-201ENST00000619106 1032 ntBASIC22.7■■□□□ 1.22
PCDHGB6Q9Y5F9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHGB6Q9Y5F9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB6Q9Y5F9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms