Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.99■□□□□ 0.95
NUP50Q9UKX7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUP50Q9UKX7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.99■□□□□ 0.95
NUP50Q9UKX7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUP50Q9UKX7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.98■□□□□ 0.95
NUP50Q9UKX7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP50Q9UKX7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
NUP50Q9UKX7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP50Q9UKX7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NUP50Q9UKX7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NUP50Q9UKX7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP50Q9UKX7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NUP50Q9UKX7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP50Q9UKX7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NUP50Q9UKX7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.97■□□□□ 0.95
NUP50Q9UKX7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP50Q9UKX7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP50Q9UKX7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP50Q9UKX7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP50Q9UKX7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP50Q9UKX7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP50Q9UKX7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.95■□□□□ 0.94
NUP50Q9UKX7 AC008813.1-201ENST00000536597 885 ntBASIC20.95■□□□□ 0.94
NUP50Q9UKX7 AC135983.2-203ENST00000454486 1613 ntBASIC20.95■□□□□ 0.94
NUP50Q9UKX7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUP50Q9UKX7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUP50Q9UKX7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUP50Q9UKX7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUP50Q9UKX7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUP50Q9UKX7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
NUP50Q9UKX7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUP50Q9UKX7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
NUP50Q9UKX7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NUP50Q9UKX7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP50Q9UKX7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP50Q9UKX7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.93■□□□□ 0.94
NUP50Q9UKX7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NUP50Q9UKX7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP50Q9UKX7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP50Q9UKX7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NUP50Q9UKX7 GPX1-201ENST00000419349 1106 ntBASIC20.92■□□□□ 0.94
NUP50Q9UKX7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP50Q9UKX7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP50Q9UKX7 WHAMMP2-203ENST00000563942 1603 ntBASIC20.92■□□□□ 0.94
NUP50Q9UKX7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP50Q9UKX7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP50Q9UKX7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP50Q9UKX7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 AC091060.1-201ENST00000623524 1766 ntBASIC20.9■□□□□ 0.94
NUP50Q9UKX7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NUP50Q9UKX7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
NUP50Q9UKX7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NUP50Q9UKX7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.89■□□□□ 0.94
NUP50Q9UKX7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUP50Q9UKX7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP50Q9UKX7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP50Q9UKX7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUP50Q9UKX7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.89■□□□□ 0.93
NUP50Q9UKX7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
NUP50Q9UKX7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.89■□□□□ 0.93
NUP50Q9UKX7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 RARRES2P2-201ENST00000394842 485 ntBASIC20.88■□□□□ 0.93
NUP50Q9UKX7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP50Q9UKX7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.87■□□□□ 0.93
NUP50Q9UKX7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUP50Q9UKX7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NUP50Q9UKX7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.87■□□□□ 0.93
NUP50Q9UKX7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NUP50Q9UKX7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUP50Q9UKX7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.86■□□□□ 0.93
NUP50Q9UKX7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP50Q9UKX7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP50Q9UKX7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUP50Q9UKX7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUP50Q9UKX7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUP50Q9UKX7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUP50Q9UKX7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUP50Q9UKX7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.85■□□□□ 0.93
NUP50Q9UKX7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUP50Q9UKX7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.85■□□□□ 0.93
NUP50Q9UKX7 RNF126P1-201ENST00000567452 1320 ntBASIC20.84■□□□□ 0.93
NUP50Q9UKX7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms