Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LCE3DQ9BYE3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LCE3DQ9BYE3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 ERN1-208ENST00000606895 2068 ntBASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 AP004609.3-201ENST00000610705 1884 ntBASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LCE3DQ9BYE3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
LCE3DQ9BYE3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
LCE3DQ9BYE3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 AL133380.1-201ENST00000506013 324 ntBASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LCE3DQ9BYE3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 AC142381.3-201ENST00000568208 1670 ntBASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LCE3DQ9BYE3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC6.5□□□□□ -1.37
LCE3DQ9BYE3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms