Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.76■■■□□ 2.36
RPAP1Q9BWH6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.76■■■□□ 2.36
RPAP1Q9BWH6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RPAP1Q9BWH6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.75■■■□□ 2.35
RPAP1Q9BWH6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RPAP1Q9BWH6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.75■■■□□ 2.35
RPAP1Q9BWH6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RPAP1Q9BWH6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
RPAP1Q9BWH6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RPAP1Q9BWH6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RPAP1Q9BWH6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RPAP1Q9BWH6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
RPAP1Q9BWH6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.73■■■□□ 2.35
RPAP1Q9BWH6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RPAP1Q9BWH6 AC026202.3-201ENST00000600805 1127 ntBASIC29.73■■■□□ 2.35
RPAP1Q9BWH6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RPAP1Q9BWH6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
RPAP1Q9BWH6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.71■■■□□ 2.35
RPAP1Q9BWH6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.71■■■□□ 2.35
RPAP1Q9BWH6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.71■■■□□ 2.35
RPAP1Q9BWH6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RPAP1Q9BWH6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
RPAP1Q9BWH6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RPAP1Q9BWH6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RPAP1Q9BWH6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.7■■■□□ 2.35
RPAP1Q9BWH6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.7■■■□□ 2.35
RPAP1Q9BWH6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
RPAP1Q9BWH6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RPAP1Q9BWH6 WHAMMP3-201ENST00000611636 1609 ntBASIC29.69■■■□□ 2.34
RPAP1Q9BWH6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
RPAP1Q9BWH6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
RPAP1Q9BWH6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RPAP1Q9BWH6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RPAP1Q9BWH6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RPAP1Q9BWH6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.68■■■□□ 2.34
RPAP1Q9BWH6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.68■■■□□ 2.34
RPAP1Q9BWH6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.68■■■□□ 2.34
RPAP1Q9BWH6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RPAP1Q9BWH6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
RPAP1Q9BWH6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RPAP1Q9BWH6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RPAP1Q9BWH6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.67■■■□□ 2.34
RPAP1Q9BWH6 RP9P-202ENST00000450133 1212 ntBASIC29.67■■■□□ 2.34
RPAP1Q9BWH6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
RPAP1Q9BWH6 RAP2CP1-202ENST00000605179 643 ntBASIC29.67■■■□□ 2.34
RPAP1Q9BWH6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RPAP1Q9BWH6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.65■■■□□ 2.34
RPAP1Q9BWH6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
RPAP1Q9BWH6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RPAP1Q9BWH6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RPAP1Q9BWH6 AC093536.1-201ENST00000569153 554 ntBASIC29.64■■■□□ 2.34
RPAP1Q9BWH6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
RPAP1Q9BWH6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
RPAP1Q9BWH6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RPAP1Q9BWH6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.64■■■□□ 2.33
RPAP1Q9BWH6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
RPAP1Q9BWH6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.64■■■□□ 2.33
RPAP1Q9BWH6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.63■■■□□ 2.33
RPAP1Q9BWH6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.63■■■□□ 2.33
RPAP1Q9BWH6 DUX4L18-201ENST00000553347 1267 ntBASIC29.63■■■□□ 2.33
RPAP1Q9BWH6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.63■■■□□ 2.33
RPAP1Q9BWH6 AL449106.1-201ENST00000608517 1980 ntBASIC29.63■■■□□ 2.33
RPAP1Q9BWH6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
RPAP1Q9BWH6 DUX4L9-201ENST00000449051 1259 ntBASIC29.62■■■□□ 2.33
RPAP1Q9BWH6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.62■■■□□ 2.33
RPAP1Q9BWH6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
RPAP1Q9BWH6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RPAP1Q9BWH6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.61■■■□□ 2.33
RPAP1Q9BWH6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.61■■■□□ 2.33
RPAP1Q9BWH6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RPAP1Q9BWH6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
RPAP1Q9BWH6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
RPAP1Q9BWH6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.6■■■□□ 2.33
RPAP1Q9BWH6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RPAP1Q9BWH6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
RPAP1Q9BWH6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RPAP1Q9BWH6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.59■■■□□ 2.33
RPAP1Q9BWH6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
RPAP1Q9BWH6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.58■■■□□ 2.33
RPAP1Q9BWH6 MIR3960-201ENST00000583311 91 ntBASIC29.58■■■□□ 2.33
RPAP1Q9BWH6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.58■■■□□ 2.33
RPAP1Q9BWH6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
RPAP1Q9BWH6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.57■■■□□ 2.32
RPAP1Q9BWH6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
RPAP1Q9BWH6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.57■■■□□ 2.32
RPAP1Q9BWH6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RPAP1Q9BWH6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.57■■■□□ 2.32
RPAP1Q9BWH6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
RPAP1Q9BWH6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.56■■■□□ 2.32
RPAP1Q9BWH6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.56■■■□□ 2.32
RPAP1Q9BWH6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RPAP1Q9BWH6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.55■■■□□ 2.32
RPAP1Q9BWH6 SPCS2P3-201ENST00000500401 656 ntBASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms