Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV9Q99603 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV9Q99603 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV9Q99603 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRGV9Q99603 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV9Q99603 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRGV9Q99603 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV9Q99603 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV9Q99603 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV9Q99603 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRGV9Q99603 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRGV9Q99603 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRGV9Q99603 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV9Q99603 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.93■□□□□ 0.62
TRGV9Q99603 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV9Q99603 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.93■□□□□ 0.62
TRGV9Q99603 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRGV9Q99603 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV9Q99603 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRGV9Q99603 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV9Q99603 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV9Q99603 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV9Q99603 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV9Q99603 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRGV9Q99603 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV9Q99603 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV9Q99603 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV9Q99603 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRGV9Q99603 AC142381.3-201ENST00000568208 1670 ntBASIC18.91■□□□□ 0.62
TRGV9Q99603 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRGV9Q99603 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV9Q99603 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV9Q99603 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV9Q99603 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV9Q99603 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV9Q99603 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRGV9Q99603 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.9■□□□□ 0.62
TRGV9Q99603 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TRGV9Q99603 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV9Q99603 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.89■□□□□ 0.61
TRGV9Q99603 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV9Q99603 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV9Q99603 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.89■□□□□ 0.61
TRGV9Q99603 DUX4L11-201ENST00000611504 1267 ntBASIC18.89■□□□□ 0.61
TRGV9Q99603 DUX4L12-201ENST00000614593 1267 ntBASIC18.89■□□□□ 0.61
TRGV9Q99603 DUX4L14-201ENST00000621227 1267 ntBASIC18.89■□□□□ 0.61
TRGV9Q99603 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRGV9Q99603 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRGV9Q99603 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TRGV9Q99603 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV9Q99603 AC093323.1-202ENST00000635031 2045 ntBASIC18.88■□□□□ 0.61
TRGV9Q99603 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.88■□□□□ 0.61
TRGV9Q99603 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.88■□□□□ 0.61
TRGV9Q99603 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV9Q99603 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRGV9Q99603 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.88■□□□□ 0.61
TRGV9Q99603 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV9Q99603 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV9Q99603 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRGV9Q99603 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRGV9Q99603 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRGV9Q99603 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
TRGV9Q99603 AL359258.2-201ENST00000564063 1566 ntBASIC18.86■□□□□ 0.61
TRGV9Q99603 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV9Q99603 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV9Q99603 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.86■□□□□ 0.61
TRGV9Q99603 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRGV9Q99603 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.86■□□□□ 0.61
TRGV9Q99603 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.85■□□□□ 0.61
TRGV9Q99603 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.85■□□□□ 0.61
TRGV9Q99603 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRGV9Q99603 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRGV9Q99603 AC096887.2-201ENST00000623443 1957 ntBASIC18.84■□□□□ 0.61
TRGV9Q99603 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRGV9Q99603 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRGV9Q99603 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRGV9Q99603 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TRGV9Q99603 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.84■□□□□ 0.61
TRGV9Q99603 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.84■□□□□ 0.61
TRGV9Q99603 RPS2P35-201ENST00000443417 897 ntBASIC18.84■□□□□ 0.61
TRGV9Q99603 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.84■□□□□ 0.61
TRGV9Q99603 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.84■□□□□ 0.61
TRGV9Q99603 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.83■□□□□ 0.61
TRGV9Q99603 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.83■□□□□ 0.61
TRGV9Q99603 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRGV9Q99603 AL359504.2-201ENST00000605506 1601 ntBASIC18.83■□□□□ 0.61
TRGV9Q99603 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRGV9Q99603 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRGV9Q99603 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.83■□□□□ 0.6
TRGV9Q99603 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRGV9Q99603 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRGV9Q99603 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRGV9Q99603 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
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