Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL21A1Q96P44 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL21A1Q96P44 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL21A1Q96P44 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL21A1Q96P44 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL21A1Q96P44 AC126177.7-201ENST00000547904 679 ntBASIC22.91■■□□□ 1.26
COL21A1Q96P44 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL21A1Q96P44 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.9■■□□□ 1.26
COL21A1Q96P44 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL21A1Q96P44 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.89■■□□□ 1.26
COL21A1Q96P44 AC092803.2-201ENST00000564287 1899 ntBASIC22.89■■□□□ 1.25
COL21A1Q96P44 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL21A1Q96P44 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.88■■□□□ 1.25
COL21A1Q96P44 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL21A1Q96P44 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.88■■□□□ 1.25
COL21A1Q96P44 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.88■■□□□ 1.25
COL21A1Q96P44 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.88■■□□□ 1.25
COL21A1Q96P44 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL21A1Q96P44 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.88■■□□□ 1.25
COL21A1Q96P44 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.88■■□□□ 1.25
COL21A1Q96P44 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL21A1Q96P44 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL21A1Q96P44 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL21A1Q96P44 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL21A1Q96P44 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL21A1Q96P44 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL21A1Q96P44 AL359258.2-201ENST00000564063 1566 ntBASIC22.87■■□□□ 1.25
COL21A1Q96P44 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
COL21A1Q96P44 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL21A1Q96P44 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.86■■□□□ 1.25
COL21A1Q96P44 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
COL21A1Q96P44 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
COL21A1Q96P44 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL21A1Q96P44 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL21A1Q96P44 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL21A1Q96P44 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL21A1Q96P44 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL21A1Q96P44 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
COL21A1Q96P44 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.84■■□□□ 1.25
COL21A1Q96P44 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL21A1Q96P44 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL21A1Q96P44 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.83■■□□□ 1.25
COL21A1Q96P44 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.83■■□□□ 1.25
COL21A1Q96P44 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL21A1Q96P44 DUSP8P4-201ENST00000399538 1761 ntBASIC22.83■■□□□ 1.24
COL21A1Q96P44 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
COL21A1Q96P44 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.83■■□□□ 1.24
COL21A1Q96P44 AC020928.2-201ENST00000588717 2197 ntBASIC22.83■■□□□ 1.24
COL21A1Q96P44 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL21A1Q96P44 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL21A1Q96P44 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL21A1Q96P44 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
COL21A1Q96P44 AC022413.1-201ENST00000624602 984 ntBASIC22.82■■□□□ 1.24
COL21A1Q96P44 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL21A1Q96P44 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL21A1Q96P44 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL21A1Q96P44 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
COL21A1Q96P44 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.81■■□□□ 1.24
COL21A1Q96P44 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
COL21A1Q96P44 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.81■■□□□ 1.24
COL21A1Q96P44 AC060814.1-201ENST00000554326 538 ntBASIC22.81■■□□□ 1.24
COL21A1Q96P44 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL21A1Q96P44 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL21A1Q96P44 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL21A1Q96P44 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL21A1Q96P44 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.8■■□□□ 1.24
COL21A1Q96P44 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.8■■□□□ 1.24
COL21A1Q96P44 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.79■■□□□ 1.24
COL21A1Q96P44 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL21A1Q96P44 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL21A1Q96P44 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.79■■□□□ 1.24
COL21A1Q96P44 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL21A1Q96P44 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL21A1Q96P44 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
COL21A1Q96P44 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL21A1Q96P44 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL21A1Q96P44 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL21A1Q96P44 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
COL21A1Q96P44 GPX1-201ENST00000419349 1106 ntBASIC22.78■■□□□ 1.24
COL21A1Q96P44 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL21A1Q96P44 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL21A1Q96P44 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL21A1Q96P44 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.77■■□□□ 1.24
COL21A1Q96P44 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
COL21A1Q96P44 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.77■■□□□ 1.24
COL21A1Q96P44 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL21A1Q96P44 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL21A1Q96P44 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
COL21A1Q96P44 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL21A1Q96P44 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms