Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
RPS4Y2Q8TD47 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.33■■□□□ 1
RPS4Y2Q8TD47 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RPS4Y2Q8TD47 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AC096887.2-201ENST00000623443 1957 ntBASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AC021231.2-201ENST00000594613 730 ntBASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AC022211.4-201ENST00000625094 2161 ntBASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 AL139125.2-201ENST00000623134 1869 ntBASIC21.29■■□□□ 1
RPS4Y2Q8TD47 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 AC138932.3-201ENST00000567634 1902 ntBASIC21.29■■□□□ 1
RPS4Y2Q8TD47 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.27■□□□□ 0.99
RPS4Y2Q8TD47 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.27■□□□□ 0.99
RPS4Y2Q8TD47 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPS4Y2Q8TD47 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPS4Y2Q8TD47 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS4Y2Q8TD47 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS4Y2Q8TD47 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
RPS4Y2Q8TD47 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 DUX4L29-201ENST00000425409 679 ntBASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms