Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
RPS4Y2Q8TD47 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.33■■□□□ 1
RPS4Y2Q8TD47 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RPS4Y2Q8TD47 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RPS4Y2Q8TD47 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AC096887.2-201ENST00000623443 1957 ntBASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AC021231.2-201ENST00000594613 730 ntBASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AC022211.4-201ENST00000625094 2161 ntBASIC21.31■■□□□ 1
RPS4Y2Q8TD47 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPS4Y2Q8TD47 AL139125.2-201ENST00000623134 1869 ntBASIC21.29■■□□□ 1
RPS4Y2Q8TD47 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.29■■□□□ 1
RPS4Y2Q8TD47 AC138932.3-201ENST00000567634 1902 ntBASIC21.29■■□□□ 1
RPS4Y2Q8TD47 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS4Y2Q8TD47 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RPS4Y2Q8TD47 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.27■□□□□ 0.99
RPS4Y2Q8TD47 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.27■□□□□ 0.99
RPS4Y2Q8TD47 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RPS4Y2Q8TD47 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.26■□□□□ 0.99
RPS4Y2Q8TD47 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPS4Y2Q8TD47 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPS4Y2Q8TD47 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS4Y2Q8TD47 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS4Y2Q8TD47 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPS4Y2Q8TD47 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RPS4Y2Q8TD47 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
RPS4Y2Q8TD47 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 DUX4L29-201ENST00000425409 679 ntBASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS4Y2Q8TD47 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPS4Y2Q8TD47 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPS4Y2Q8TD47 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms