Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 AC060814.1-201ENST00000554326 538 ntBASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDH19Q8TAB3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH19Q8TAB3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH19Q8TAB3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
PCDH19Q8TAB3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH19Q8TAB3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH19Q8TAB3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
PCDH19Q8TAB3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH19Q8TAB3 AL157400.5-201ENST00000507624 621 ntBASIC25.21■■□□□ 1.63
PCDH19Q8TAB3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH19Q8TAB3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH19Q8TAB3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
PCDH19Q8TAB3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH19Q8TAB3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH19Q8TAB3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH19Q8TAB3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH19Q8TAB3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH19Q8TAB3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH19Q8TAB3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH19Q8TAB3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH19Q8TAB3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH19Q8TAB3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 ERN1-208ENST00000606895 2068 ntBASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH19Q8TAB3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.16■■□□□ 1.62
PCDH19Q8TAB3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
PCDH19Q8TAB3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH19Q8TAB3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH19Q8TAB3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH19Q8TAB3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.15■■□□□ 1.62
PCDH19Q8TAB3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDH19Q8TAB3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH19Q8TAB3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH19Q8TAB3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDH19Q8TAB3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH19Q8TAB3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH19Q8TAB3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH19Q8TAB3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH19Q8TAB3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH19Q8TAB3 AC092296.2-201ENST00000589470 999 ntBASIC25.13■■□□□ 1.61
PCDH19Q8TAB3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH19Q8TAB3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH19Q8TAB3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH19Q8TAB3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDH19Q8TAB3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDH19Q8TAB3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 AC022413.1-201ENST00000624602 984 ntBASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH19Q8TAB3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 AC025884.2-201ENST00000553429 711 ntBASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 AC010501.1-201ENST00000606270 1962 ntBASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH19Q8TAB3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH19Q8TAB3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH19Q8TAB3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDH19Q8TAB3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PCDH19Q8TAB3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH19Q8TAB3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH19Q8TAB3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDH19Q8TAB3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PCDH19Q8TAB3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDH19Q8TAB3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.08■■□□□ 1.6
PCDH19Q8TAB3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.08■■□□□ 1.6
PCDH19Q8TAB3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH19Q8TAB3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDH19Q8TAB3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.07■■□□□ 1.6
PCDH19Q8TAB3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDH19Q8TAB3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 246.5 ms