Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
VPS36Q86VN1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
VPS36Q86VN1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.12■■□□□ 1.77
VPS36Q86VN1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.12■■□□□ 1.77
VPS36Q86VN1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
VPS36Q86VN1 AC135731.1-201ENST00000569415 2548 ntBASIC26.12■■□□□ 1.77
VPS36Q86VN1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS36Q86VN1 AC010501.1-201ENST00000606270 1962 ntBASIC26.11■■□□□ 1.77
VPS36Q86VN1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.11■■□□□ 1.77
VPS36Q86VN1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.11■■□□□ 1.77
VPS36Q86VN1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
VPS36Q86VN1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
VPS36Q86VN1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.1■■□□□ 1.77
VPS36Q86VN1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
VPS36Q86VN1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
VPS36Q86VN1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS36Q86VN1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
VPS36Q86VN1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.09■■□□□ 1.77
VPS36Q86VN1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.09■■□□□ 1.77
VPS36Q86VN1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
VPS36Q86VN1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
VPS36Q86VN1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
VPS36Q86VN1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
VPS36Q86VN1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS36Q86VN1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
VPS36Q86VN1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
VPS36Q86VN1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
VPS36Q86VN1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.08■■□□□ 1.77
VPS36Q86VN1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.77
VPS36Q86VN1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS36Q86VN1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS36Q86VN1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS36Q86VN1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
VPS36Q86VN1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
VPS36Q86VN1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.07■■□□□ 1.76
VPS36Q86VN1 AL359258.2-201ENST00000564063 1566 ntBASIC26.07■■□□□ 1.76
VPS36Q86VN1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
VPS36Q86VN1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS36Q86VN1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
VPS36Q86VN1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
VPS36Q86VN1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
VPS36Q86VN1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.05■■□□□ 1.76
VPS36Q86VN1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.05■■□□□ 1.76
VPS36Q86VN1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.05■■□□□ 1.76
VPS36Q86VN1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
VPS36Q86VN1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
VPS36Q86VN1 ERN1-208ENST00000606895 2068 ntBASIC26.05■■□□□ 1.76
VPS36Q86VN1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
VPS36Q86VN1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
VPS36Q86VN1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.05■■□□□ 1.76
VPS36Q86VN1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.05■■□□□ 1.76
VPS36Q86VN1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
VPS36Q86VN1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
VPS36Q86VN1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
VPS36Q86VN1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS36Q86VN1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
VPS36Q86VN1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
VPS36Q86VN1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.04■■□□□ 1.76
VPS36Q86VN1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
VPS36Q86VN1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS36Q86VN1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS36Q86VN1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS36Q86VN1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
VPS36Q86VN1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
VPS36Q86VN1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.02■■□□□ 1.76
VPS36Q86VN1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
VPS36Q86VN1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VPS36Q86VN1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VPS36Q86VN1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VPS36Q86VN1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
VPS36Q86VN1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
VPS36Q86VN1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.01■■□□□ 1.75
VPS36Q86VN1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VPS36Q86VN1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
VPS36Q86VN1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
VPS36Q86VN1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26■■□□□ 1.75
VPS36Q86VN1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26■■□□□ 1.75
VPS36Q86VN1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
VPS36Q86VN1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
VPS36Q86VN1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.99■■□□□ 1.75
VPS36Q86VN1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
VPS36Q86VN1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VPS36Q86VN1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VPS36Q86VN1 AC126177.7-201ENST00000547904 679 ntBASIC25.98■■□□□ 1.75
VPS36Q86VN1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VPS36Q86VN1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VPS36Q86VN1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
VPS36Q86VN1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
VPS36Q86VN1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
VPS36Q86VN1 AL359504.2-201ENST00000605506 1601 ntBASIC25.96■■□□□ 1.75
VPS36Q86VN1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
VPS36Q86VN1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.96■■□□□ 1.75
VPS36Q86VN1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.96■■□□□ 1.75
VPS36Q86VN1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VPS36Q86VN1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VPS36Q86VN1 CR559946.2-201ENST00000623684 991 ntBASIC25.95■■□□□ 1.74
VPS36Q86VN1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VPS36Q86VN1 MIR3648-2-201ENST00000581792 180 ntBASIC25.94■■□□□ 1.74
VPS36Q86VN1 MIR3648-1-201ENST00000615959 180 ntBASIC25.94■■□□□ 1.74
VPS36Q86VN1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms