Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 AC021242.3-201ENST00000607598 1377 ntBASIC28.52■■■□□ 2.16
COL13A1Q5TAT6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL13A1Q5TAT6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.52■■■□□ 2.16
COL13A1Q5TAT6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
COL13A1Q5TAT6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL13A1Q5TAT6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
COL13A1Q5TAT6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.51■■■□□ 2.15
COL13A1Q5TAT6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.51■■■□□ 2.15
COL13A1Q5TAT6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL13A1Q5TAT6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL13A1Q5TAT6 AC092028.1-203ENST00000608262 953 ntBASIC28.5■■■□□ 2.15
COL13A1Q5TAT6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL13A1Q5TAT6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL13A1Q5TAT6 AL356740.2-201ENST00000601559 647 ntBASIC28.49■■■□□ 2.15
COL13A1Q5TAT6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
COL13A1Q5TAT6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL13A1Q5TAT6 AC087393.1-201ENST00000582896 145 ntBASIC28.48■■■□□ 2.15
COL13A1Q5TAT6 AC137630.3-201ENST00000607245 391 ntBASIC28.48■■■□□ 2.15
COL13A1Q5TAT6 IKBKGP1-201ENST00000612193 1073 ntBASIC28.48■■■□□ 2.15
COL13A1Q5TAT6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL13A1Q5TAT6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
COL13A1Q5TAT6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.47■■■□□ 2.15
COL13A1Q5TAT6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL13A1Q5TAT6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.46■■■□□ 2.15
COL13A1Q5TAT6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.46■■■□□ 2.15
COL13A1Q5TAT6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL13A1Q5TAT6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL13A1Q5TAT6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
COL13A1Q5TAT6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.45■■■□□ 2.14
COL13A1Q5TAT6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.45■■■□□ 2.14
COL13A1Q5TAT6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
COL13A1Q5TAT6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL13A1Q5TAT6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.44■■■□□ 2.14
COL13A1Q5TAT6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
COL13A1Q5TAT6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.44■■■□□ 2.14
COL13A1Q5TAT6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL13A1Q5TAT6 AL512631.2-201ENST00000604634 923 ntBASIC28.44■■■□□ 2.14
COL13A1Q5TAT6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL13A1Q5TAT6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL13A1Q5TAT6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.43■■■□□ 2.14
COL13A1Q5TAT6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.43■■■□□ 2.14
COL13A1Q5TAT6 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.43■■■□□ 2.14
COL13A1Q5TAT6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
COL13A1Q5TAT6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL13A1Q5TAT6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
COL13A1Q5TAT6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.41■■■□□ 2.14
COL13A1Q5TAT6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.41■■■□□ 2.14
COL13A1Q5TAT6 MIR6724-1-201ENST00000616420 92 ntBASIC28.41■■■□□ 2.14
COL13A1Q5TAT6 MIR6724-2-201ENST00000616483 92 ntBASIC28.41■■■□□ 2.14
COL13A1Q5TAT6 MIR6724-4-201ENST00000617390 92 ntBASIC28.41■■■□□ 2.14
COL13A1Q5TAT6 MIR6724-3-201ENST00000622482 92 ntBASIC28.41■■■□□ 2.14
COL13A1Q5TAT6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL13A1Q5TAT6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
COL13A1Q5TAT6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL13A1Q5TAT6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL13A1Q5TAT6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL13A1Q5TAT6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
COL13A1Q5TAT6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
COL13A1Q5TAT6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.39■■■□□ 2.14
COL13A1Q5TAT6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 AC010997.5-201ENST00000609182 354 ntBASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL13A1Q5TAT6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL13A1Q5TAT6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
COL13A1Q5TAT6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.37■■■□□ 2.13
COL13A1Q5TAT6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL13A1Q5TAT6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
COL13A1Q5TAT6 UNC93B3-201ENST00000308076 687 ntBASIC28.35■■■□□ 2.13
COL13A1Q5TAT6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
COL13A1Q5TAT6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.35■■■□□ 2.13
COL13A1Q5TAT6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
COL13A1Q5TAT6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COL13A1Q5TAT6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COL13A1Q5TAT6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
COL13A1Q5TAT6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
COL13A1Q5TAT6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.33■■■□□ 2.13
COL13A1Q5TAT6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
COL13A1Q5TAT6 AL137784.2-201ENST00000607332 1000 ntBASIC28.33■■■□□ 2.13
COL13A1Q5TAT6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.33■■■□□ 2.13
COL13A1Q5TAT6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL13A1Q5TAT6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COL13A1Q5TAT6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COL13A1Q5TAT6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
COL13A1Q5TAT6 AL355001.2-201ENST00000620617 1191 ntBASIC28.32■■■□□ 2.12
COL13A1Q5TAT6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COL13A1Q5TAT6 AL136162.1-201ENST00000607711 1078 ntBASIC28.31■■■□□ 2.12
COL13A1Q5TAT6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
COL13A1Q5TAT6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL13A1Q5TAT6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
COL13A1Q5TAT6 EDA-201ENST00000338901 1233 ntBASIC28.3■■■□□ 2.12
COL13A1Q5TAT6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
COL13A1Q5TAT6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms