Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01554Q52M75 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC01554Q52M75 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01554Q52M75 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01554Q52M75 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01554Q52M75 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01554Q52M75 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC01554Q52M75 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01554Q52M75 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01554Q52M75 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01554Q52M75 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC01554Q52M75 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC01554Q52M75 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01554Q52M75 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01554Q52M75 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01554Q52M75 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01554Q52M75 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01554Q52M75 USP48-205ENST00000421625 2818 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01554Q52M75 AF106564.1-201ENST00000607058 2553 ntBASIC12.14□□□□□ -0.47
LINC01554Q52M75 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01554Q52M75 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC01554Q52M75 PALM-208ENST00000592155 2272 ntTSL 4 BASIC12.13□□□□□ -0.47
LINC01554Q52M75 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01554Q52M75 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01554Q52M75 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01554Q52M75 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01554Q52M75 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01554Q52M75 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01554Q52M75 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC01554Q52M75 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01554Q52M75 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01554Q52M75 AL158211.5-201ENST00000623583 2518 ntBASIC12.13□□□□□ -0.47
LINC01554Q52M75 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC01554Q52M75 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01554Q52M75 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01554Q52M75 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01554Q52M75 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01554Q52M75 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01554Q52M75 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
LINC01554Q52M75 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01554Q52M75 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC01554Q52M75 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC01554Q52M75 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC01554Q52M75 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01554Q52M75 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01554Q52M75 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LINC01554Q52M75 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LINC01554Q52M75 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01554Q52M75 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01554Q52M75 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01554Q52M75 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01554Q52M75 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01554Q52M75 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01554Q52M75 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01554Q52M75 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01554Q52M75 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01554Q52M75 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01554Q52M75 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01554Q52M75 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
LINC01554Q52M75 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01554Q52M75 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01554Q52M75 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01554Q52M75 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01554Q52M75 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC01554Q52M75 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC01554Q52M75 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC01554Q52M75 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC01554Q52M75 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LINC01554Q52M75 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LINC01554Q52M75 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01554Q52M75 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01554Q52M75 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC01554Q52M75 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01554Q52M75 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01554Q52M75 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC01554Q52M75 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01554Q52M75 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01554Q52M75 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01554Q52M75 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms