Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 DMA1YHR115C 1251 nt6.97□□□□□ -1.29
VPS38Q05919 LYS1YIR034C 1122 nt6.97□□□□□ -1.29
VPS38Q05919 PUS5YLR165C 765 nt6.97□□□□□ -1.29
VPS38Q05919 RUF23RUF23 254 nt6.97□□□□□ -1.29
VPS38Q05919 AVT4YNL101W 2142 nt6.96□□□□□ -1.3
VPS38Q05919 SPE3YPR069C 882 nt6.96□□□□□ -1.3
VPS38Q05919 YCR061WYCR061W 1896 nt6.96□□□□□ -1.3
VPS38Q05919 PGM1YKL127W 1713 nt6.96□□□□□ -1.3
VPS38Q05919 PRY3YJL078C 2646 nt6.95□□□□□ -1.3
VPS38Q05919 QCR8YJL166W 285 nt6.95□□□□□ -1.3
VPS38Q05919 LDB7YBL006C 543 nt6.95□□□□□ -1.3
VPS38Q05919 LSC1YOR142W 990 nt6.95□□□□□ -1.3
VPS38Q05919 YGR054WYGR054W 1929 nt6.95□□□□□ -1.3
VPS38Q05919 BIO3YNR058W 1443 nt6.94□□□□□ -1.3
VPS38Q05919 GEF1YJR040W 2340 nt6.94□□□□□ -1.3
VPS38Q05919 YDL085C-AYDL085C-A 207 nt6.94□□□□□ -1.3
VPS38Q05919 VMA3YEL027W 483 nt6.94□□□□□ -1.3
VPS38Q05919 HOC1YJR075W 1191 nt6.94□□□□□ -1.3
VPS38Q05919 YNL200CYNL200C 741 nt6.94□□□□□ -1.3
VPS38Q05919 BSC4YNL269W 396 nt6.94□□□□□ -1.3
VPS38Q05919 ARE2YNR019W 1929 nt6.93□□□□□ -1.3
VPS38Q05919 GPI11YDR302W 660 nt6.93□□□□□ -1.3
VPS38Q05919 BIM1YER016W 1035 nt6.93□□□□□ -1.3
VPS38Q05919 CIS3YJL158C 684 nt6.93□□□□□ -1.3
VPS38Q05919 CTF19YPL018W 1110 nt6.93□□□□□ -1.3
VPS38Q05919 MPH3YJR160C 1809 nt6.92□□□□□ -1.3
VPS38Q05919 DUS4YLR405W 1104 nt6.92□□□□□ -1.3
VPS38Q05919 IMA5YJL216C 1746 nt6.92□□□□□ -1.3
VPS38Q05919 TPO3YPR156C 1869 nt6.92□□□□□ -1.3
VPS38Q05919 CCT8YJL008C 1707 nt6.91□□□□□ -1.3
VPS38Q05919 HRQ1YDR291W 3234 nt6.91□□□□□ -1.3
VPS38Q05919 YEN1YER041W 2280 nt6.91□□□□□ -1.3
VPS38Q05919 FHN1YGR131W 525 nt6.91□□□□□ -1.3
VPS38Q05919 COA1YIL157C 594 nt6.91□□□□□ -1.3
VPS38Q05919 ASF1YJL115W 840 nt6.91□□□□□ -1.3
VPS38Q05919 LIA1YJR070C 978 nt6.91□□□□□ -1.3
VPS38Q05919 IES2YNL215W 963 nt6.91□□□□□ -1.3
VPS38Q05919 ECM31YBR176W 939 nt6.91□□□□□ -1.3
VPS38Q05919 YPL277CYPL277C 1464 nt6.91□□□□□ -1.3
VPS38Q05919 FMO1YHR176W 1299 nt6.9□□□□□ -1.3
VPS38Q05919 LCB3YJL134W 1230 nt6.9□□□□□ -1.3
VPS38Q05919 HMS2YJR147W 1077 nt6.9□□□□□ -1.3
VPS38Q05919 MEH1YKR007W 555 nt6.9□□□□□ -1.3
VPS38Q05919 KTR1YOR099W 1182 nt6.9□□□□□ -1.3
VPS38Q05919 YOR300WYOR300W 309 nt6.9□□□□□ -1.3
VPS38Q05919 VMA2YBR127C 1554 nt6.9□□□□□ -1.31
VPS38Q05919 ASN2YGR124W 1719 nt6.9□□□□□ -1.31
VPS38Q05919 YOS9YDR057W 1629 nt6.89□□□□□ -1.31
VPS38Q05919 CEF1YMR213W 1773 nt6.88□□□□□ -1.31
VPS38Q05919 MAK32YCR019W 1092 nt6.88□□□□□ -1.31
VPS38Q05919 CSM2YIL132C 642 nt6.88□□□□□ -1.31
VPS38Q05919 YIR042CYIR042C 711 nt6.88□□□□□ -1.31
VPS38Q05919 PFK2YMR205C 2880 nt6.87□□□□□ -1.31
VPS38Q05919 MRPL1YDR116C 858 nt6.87□□□□□ -1.31
VPS38Q05919 LCL3YGL085W 825 nt6.87□□□□□ -1.31
VPS38Q05919 SRL2YLR082C 1179 nt6.87□□□□□ -1.31
VPS38Q05919 AAD14YNL331C 1131 nt6.87□□□□□ -1.31
VPS38Q05919 RAP1YNL216W 2484 nt6.86□□□□□ -1.31
VPS38Q05919 MSO1YNR049C 633 nt6.86□□□□□ -1.31
VPS38Q05919 GPD1YDL022W 1176 nt6.85□□□□□ -1.31
VPS38Q05919 YDR278CYDR278C 318 nt6.85□□□□□ -1.31
VPS38Q05919 MRPL35YDR322W 1104 nt6.85□□□□□ -1.31
VPS38Q05919 TMT1YER175C 900 nt6.85□□□□□ -1.31
VPS38Q05919 DPH5YLR172C 903 nt6.85□□□□□ -1.31
VPS38Q05919 TAF9YMR236W 474 nt6.85□□□□□ -1.31
VPS38Q05919 GTO3YMR251W 1101 nt6.85□□□□□ -1.31
VPS38Q05919 PTC4YBR125C 1182 nt6.85□□□□□ -1.31
VPS38Q05919 RPL21AYBR191W 483 nt6.85□□□□□ -1.31
VPS38Q05919 NMD5YJR132W 3147 nt6.85□□□□□ -1.31
VPS38Q05919 PLB3YOL011W 2061 nt6.85□□□□□ -1.31
VPS38Q05919 YHC3YJL059W 1227 nt6.84□□□□□ -1.31
VPS38Q05919 POP5YAL033W 522 nt6.84□□□□□ -1.31
VPS38Q05919 RIO1YOR119C 1455 nt6.84□□□□□ -1.31
VPS38Q05919 GPD2YOL059W 1323 nt6.83□□□□□ -1.32
VPS38Q05919 YML133CYML133C 4125 nt6.83□□□□□ -1.32
VPS38Q05919 PPT1YGR123C 1542 nt6.83□□□□□ -1.32
VPS38Q05919 CYS4YGR155W 1524 nt6.83□□□□□ -1.32
VPS38Q05919 PPM1YDR435C 987 nt6.83□□□□□ -1.32
VPS38Q05919 URA1YKL216W 945 nt6.83□□□□□ -1.32
VPS38Q05919 NOG2YNR053C 1461 nt6.83□□□□□ -1.32
VPS38Q05919 SAL1YNL083W 1485 nt6.82□□□□□ -1.32
VPS38Q05919 ICT1YLR099C 1185 nt6.82□□□□□ -1.32
VPS38Q05919 YML6YML025C 861 nt6.82□□□□□ -1.32
VPS38Q05919 COS10YNR075W 1125 nt6.82□□□□□ -1.32
VPS38Q05919 PRP2YNR011C 2631 nt6.82□□□□□ -1.32
VPS38Q05919 ADE17YMR120C 1779 nt6.82□□□□□ -1.32
VPS38Q05919 COX9YDL067C 180 nt6.81□□□□□ -1.32
VPS38Q05919 TPK1YJL164C 1194 nt6.81□□□□□ -1.32
VPS38Q05919 PTC3YBL056W 1407 nt6.81□□□□□ -1.32
VPS38Q05919 HAL5YJL165C 2568 nt6.81□□□□□ -1.32
VPS38Q05919 ARA2YMR041C 1008 nt6.8□□□□□ -1.32
VPS38Q05919 PUS4YNL292W 1212 nt6.8□□□□□ -1.32
VPS38Q05919 MRPS18YNL306W 654 nt6.8□□□□□ -1.32
VPS38Q05919 YMC1YPR058W 924 nt6.8□□□□□ -1.32
VPS38Q05919 AMD2YDR242W 1650 nt6.8□□□□□ -1.32
VPS38Q05919 YHL017WYHL017W 1599 nt6.79□□□□□ -1.32
VPS38Q05919 YEL009C-AYEL009C-A 408 nt6.79□□□□□ -1.32
VPS38Q05919 OM45YIL136W 1182 nt6.79□□□□□ -1.32
VPS38Q05919 YKR045CYKR045C 552 nt6.79□□□□□ -1.32
VPS38Q05919 MHT1YLL062C 975 nt6.79□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 23.7 ms