Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS27AP62979 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.84■□□□□ 0.93
RPS27AP62979 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS27AP62979 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
RPS27AP62979 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS27AP62979 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS27AP62979 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS27AP62979 DUX4L29-201ENST00000425409 679 ntBASIC20.82■□□□□ 0.92
RPS27AP62979 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS27AP62979 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPS27AP62979 AC010501.1-201ENST00000606270 1962 ntBASIC20.81■□□□□ 0.92
RPS27AP62979 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.81■□□□□ 0.92
RPS27AP62979 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPS27AP62979 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPS27AP62979 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS27AP62979 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS27AP62979 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.8■□□□□ 0.92
RPS27AP62979 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.8■□□□□ 0.92
RPS27AP62979 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RPS27AP62979 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RPS27AP62979 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RPS27AP62979 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS27AP62979 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.79■□□□□ 0.92
RPS27AP62979 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS27AP62979 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPS27AP62979 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.78■□□□□ 0.92
RPS27AP62979 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RPS27AP62979 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS27AP62979 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS27AP62979 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RPS27AP62979 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RPS27AP62979 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.78■□□□□ 0.92
RPS27AP62979 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RPS27AP62979 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.78■□□□□ 0.92
RPS27AP62979 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS27AP62979 ERN1-208ENST00000606895 2068 ntBASIC20.77■□□□□ 0.92
RPS27AP62979 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPS27AP62979 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.77■□□□□ 0.92
RPS27AP62979 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS27AP62979 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RPS27AP62979 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS27AP62979 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.76■□□□□ 0.91
RPS27AP62979 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.76■□□□□ 0.91
RPS27AP62979 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RPS27AP62979 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS27AP62979 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPS27AP62979 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS27AP62979 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RPS27AP62979 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS27AP62979 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS27AP62979 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS27AP62979 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS27AP62979 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.74■□□□□ 0.91
RPS27AP62979 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS27AP62979 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS27AP62979 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS27AP62979 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPS27AP62979 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS27AP62979 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.73■□□□□ 0.91
RPS27AP62979 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPS27AP62979 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS27AP62979 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPS27AP62979 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.72■□□□□ 0.91
RPS27AP62979 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPS27AP62979 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPS27AP62979 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPS27AP62979 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS27AP62979 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.71■□□□□ 0.91
RPS27AP62979 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPS27AP62979 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPS27AP62979 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPS27AP62979 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS27AP62979 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS27AP62979 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.7■□□□□ 0.9
RPS27AP62979 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.7■□□□□ 0.9
RPS27AP62979 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.7■□□□□ 0.9
RPS27AP62979 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.7■□□□□ 0.9
RPS27AP62979 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS27AP62979 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPS27AP62979 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPS27AP62979 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPS27AP62979 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPS27AP62979 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.69■□□□□ 0.9
RPS27AP62979 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPS27AP62979 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPS27AP62979 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RPS27AP62979 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS27AP62979 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPS27AP62979 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPS27AP62979 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS27AP62979 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS27AP62979 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPS27AP62979 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms