Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRPEP62304 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNRPEP62304 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SNRPEP62304 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.89■□□□□ 0.61
SNRPEP62304 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNRPEP62304 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SNRPEP62304 RNF165-205ENST00000588679 2904 ntBASIC18.88■□□□□ 0.61
SNRPEP62304 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRPEP62304 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNRPEP62304 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRPEP62304 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
SNRPEP62304 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNRPEP62304 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SNRPEP62304 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC18.87■□□□□ 0.61
SNRPEP62304 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNRPEP62304 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNRPEP62304 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SNRPEP62304 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRPEP62304 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.85■□□□□ 0.61
SNRPEP62304 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPEP62304 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNRPEP62304 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.85■□□□□ 0.61
SNRPEP62304 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPEP62304 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPEP62304 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRPEP62304 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPEP62304 LINC00565-201ENST00000562710 2331 ntBASIC18.84■□□□□ 0.61
SNRPEP62304 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SNRPEP62304 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPEP62304 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPEP62304 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPEP62304 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPEP62304 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPEP62304 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPEP62304 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPEP62304 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SNRPEP62304 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNRPEP62304 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPEP62304 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRPEP62304 C1orf229-201ENST00000623686 2258 ntBASIC18.81■□□□□ 0.6
SNRPEP62304 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRPEP62304 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRPEP62304 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRPEP62304 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNRPEP62304 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRPEP62304 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRPEP62304 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SNRPEP62304 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.8■□□□□ 0.6
SNRPEP62304 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRPEP62304 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNRPEP62304 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRPEP62304 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRPEP62304 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRPEP62304 ABCB10P4-201ENST00000566803 2184 ntBASIC18.79■□□□□ 0.6
SNRPEP62304 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRPEP62304 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNRPEP62304 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.79■□□□□ 0.6
SNRPEP62304 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRPEP62304 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRPEP62304 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRPEP62304 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRPEP62304 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRPEP62304 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRPEP62304 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRPEP62304 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SNRPEP62304 DUSP8P5-201ENST00000422884 1815 ntBASIC18.78■□□□□ 0.6
SNRPEP62304 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRPEP62304 AC138932.3-201ENST00000567634 1902 ntBASIC18.78■□□□□ 0.6
SNRPEP62304 AL117328.2-201ENST00000624617 1940 ntBASIC18.78■□□□□ 0.6
SNRPEP62304 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRPEP62304 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRPEP62304 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.77■□□□□ 0.6
SNRPEP62304 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.77■□□□□ 0.6
SNRPEP62304 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRPEP62304 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.77■□□□□ 0.6
SNRPEP62304 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SNRPEP62304 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRPEP62304 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SNRPEP62304 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SNRPEP62304 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNRPEP62304 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRPEP62304 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNRPEP62304 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.76■□□□□ 0.59
SNRPEP62304 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRPEP62304 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRPEP62304 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms