Protein–RNA interactions for Protein: P56182

RRP1, Ribosomal RNA processing protein 1 homolog A, humanhuman

Known RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1P56182 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.39■■■□□ 2.62
RRP1P56182 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.62
RRP1P56182 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
RRP1P56182 AC148477.6-201ENST00000623746 465 ntBASIC31.39■■■□□ 2.62
RRP1P56182 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.39■■■□□ 2.62
RRP1P56182 AC096887.2-201ENST00000623443 1957 ntBASIC31.39■■■□□ 2.62
RRP1P56182 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
RRP1P56182 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
RRP1P56182 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RRP1P56182 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RRP1P56182 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RRP1P56182 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RRP1P56182 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC31.37■■■□□ 2.61
RRP1P56182 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RRP1P56182 AC008813.1-201ENST00000536597 885 ntBASIC31.37■■■□□ 2.61
RRP1P56182 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.37■■■□□ 2.61
RRP1P56182 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
RRP1P56182 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RRP1P56182 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RRP1P56182 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
RRP1P56182 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.36■■■□□ 2.61
RRP1P56182 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
RRP1P56182 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RRP1P56182 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
RRP1P56182 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RRP1P56182 DUX4L11-201ENST00000611504 1267 ntBASIC31.35■■■□□ 2.61
RRP1P56182 DUX4L12-201ENST00000614593 1267 ntBASIC31.35■■■□□ 2.61
RRP1P56182 DUX4L14-201ENST00000621227 1267 ntBASIC31.35■■■□□ 2.61
RRP1P56182 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
RRP1P56182 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RRP1P56182 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
RRP1P56182 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
RRP1P56182 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RRP1P56182 HLA-V-202ENST00000446817 847 ntBASIC31.33■■■□□ 2.61
RRP1P56182 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RRP1P56182 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RRP1P56182 MED17-227ENST00000640521 2047 ntTSL 5 BASIC31.32■■■□□ 2.61
RRP1P56182 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
RRP1P56182 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RRP1P56182 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.32■■■□□ 2.6
RRP1P56182 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
RRP1P56182 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.32■■■□□ 2.6
RRP1P56182 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
RRP1P56182 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RRP1P56182 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
RRP1P56182 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RRP1P56182 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RRP1P56182 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.31■■■□□ 2.6
RRP1P56182 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
RRP1P56182 AC142381.3-201ENST00000568208 1670 ntBASIC31.31■■■□□ 2.6
RRP1P56182 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
RRP1P56182 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RRP1P56182 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RRP1P56182 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RRP1P56182 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.3■■■□□ 2.6
RRP1P56182 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.3■■■□□ 2.6
RRP1P56182 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
RRP1P56182 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RRP1P56182 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
RRP1P56182 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RRP1P56182 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RRP1P56182 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
RRP1P56182 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RRP1P56182 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RRP1P56182 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RRP1P56182 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RRP1P56182 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RRP1P56182 AL359504.2-201ENST00000605506 1601 ntBASIC31.27■■■□□ 2.6
RRP1P56182 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
RRP1P56182 AL359258.2-201ENST00000564063 1566 ntBASIC31.26■■■□□ 2.6
RRP1P56182 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RRP1P56182 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RRP1P56182 AC022211.4-201ENST00000625094 2161 ntBASIC31.26■■■□□ 2.59
RRP1P56182 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RRP1P56182 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.25■■■□□ 2.59
RRP1P56182 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RRP1P56182 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RRP1P56182 AC138932.3-201ENST00000567634 1902 ntBASIC31.24■■■□□ 2.59
RRP1P56182 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.24■■■□□ 2.59
RRP1P56182 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.24■■■□□ 2.59
RRP1P56182 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.24■■■□□ 2.59
RRP1P56182 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RRP1P56182 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.24■■■□□ 2.59
RRP1P56182 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RRP1P56182 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RRP1P56182 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.23■■■□□ 2.59
RRP1P56182 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RRP1P56182 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.23■■■□□ 2.59
RRP1P56182 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RRP1P56182 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.23■■■□□ 2.59
RRP1P56182 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
RRP1P56182 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.22■■■□□ 2.59
RRP1P56182 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.22■■■□□ 2.59
RRP1P56182 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC31.22■■■□□ 2.59
RRP1P56182 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.21■■■□□ 2.59
RRP1P56182 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RRP1P56182 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
RRP1P56182 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC31.2■■■□□ 2.58
RRP1P56182 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.2■■■□□ 2.58
RRP1P56182 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms