Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.35■□□□□ 0.212e-6■■■□□ 18.7
SFPQP23246 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.99□□□□□ -0.012e-6■■■□□ 18.7
SFPQP23246 AL359915.2-204ENST00000413531 1154 ntTSL 1 (best)6.8□□□□□ -1.322e-6■■■□□ 18.7
SFPQP23246 ATP11A-209ENST00000466946 431 ntTSL 58.06□□□□□ -1.122e-6■■■□□ 18.6
SFPQP23246 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.142e-6■■■□□ 18.6
SFPQP23246 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■■■□□ 18.6
SFPQP23246 EFHC1-204ENST00000491749 496 ntTSL 427.68■■■□□ 2.028e-8■■■□□ 18.5
SFPQP23246 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.75■□□□□ 0.918e-8■■■□□ 18.5
SFPQP23246 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.548e-8■■■□□ 18.5
SFPQP23246 EFHC1-235ENST00000637849 2746 ntTSL 517.02■□□□□ 0.328e-8■■■□□ 18.5
SFPQP23246 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.96■□□□□ 0.318e-8■■■□□ 18.5
SFPQP23246 PAQR8-203ENST00000512121 582 ntTSL 314.56□□□□□ -0.088e-8■■■□□ 18.5
SFPQP23246 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.488e-8■■■□□ 18.5
SFPQP23246 BSG-212ENST00000590218 545 ntTSL 221.39■■□□□ 1.011e-6■■■□□ 18.5
SFPQP23246 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.991e-6■■■□□ 18.5
SFPQP23246 BSG-210ENST00000576925 611 ntTSL 219.15■□□□□ 0.661e-6■■■□□ 18.5
SFPQP23246 BSG-207ENST00000573216 545 ntTSL 419.15■□□□□ 0.661e-6■■■□□ 18.5
SFPQP23246 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.79■□□□□ 0.61e-6■■■□□ 18.5
SFPQP23246 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.61■□□□□ 0.571e-6■■■□□ 18.5
SFPQP23246 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.37■□□□□ 0.531e-6■■■□□ 18.5
SFPQP23246 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.36■□□□□ 0.531e-6■■■□□ 18.5
SFPQP23246 BSG-213ENST00000613627 689 ntTSL 317.45■□□□□ 0.381e-6■■■□□ 18.5
SFPQP23246 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.35■□□□□ 0.371e-6■■■□□ 18.5
SFPQP23246 BSG-206ENST00000572899 582 ntTSL 217.33■□□□□ 0.361e-6■■■□□ 18.5
SFPQP23246 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.79■■□□□ 1.242e-6■■■□□ 18.5
SFPQP23246 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.242e-6■■■□□ 18.5
SFPQP23246 HDAC4-210ENST00000493582 3188 ntTSL 1 (best)13.67□□□□□ -0.222e-6■■■□□ 18.5
SFPQP23246 HDAC4-216ENST00000544989 342 ntTSL 513.2□□□□□ -0.32e-6■■■□□ 18.5
SFPQP23246 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.36■■■□□ 2.452e-6■■■□□ 18.5
SFPQP23246 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.292e-6■■■□□ 18.5
SFPQP23246 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.982e-6■■■□□ 18.5
SFPQP23246 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.23■□□□□ 0.512e-6■■■□□ 18.5
SFPQP23246 SLC22A23-212ENST00000497691 2555 ntTSL 1 (best)17.45■□□□□ 0.382e-6■■■□□ 18.5
SFPQP23246 SLC22A23-207ENST00000467177 1221 ntTSL 1 (best)16.11■□□□□ 0.172e-6■■■□□ 18.5
SFPQP23246 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.81■□□□□ 0.122e-6■■■□□ 18.5
SFPQP23246 SLC22A23-209ENST00000485307 1574 ntTSL 1 (best)14.96□□□□□ -0.012e-6■■■□□ 18.5
SFPQP23246 EIPR1-207ENST00000444776 594 ntTSL 419.33■□□□□ 0.683e-6■■■□□ 18.5
SFPQP23246 ZFR-204ENST00000505366 1159 ntTSL 1 (best)18.05■□□□□ 0.483e-9■■■□□ 18.5
SFPQP23246 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.073e-9■■■□□ 18.5
SFPQP23246 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.333e-7■■■□□ 18.5
SFPQP23246 ZFR-203ENST00000505204 552 ntTSL 412.85□□□□□ -0.353e-9■■■□□ 18.5
SFPQP23246 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.363e-7■■■□□ 18.5
SFPQP23246 MERTK-204ENST00000439966 2972 ntTSL 1 (best)12.63□□□□□ -0.393e-7■■■□□ 18.5
SFPQP23246 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC12.15□□□□□ -0.463e-7■■■□□ 18.5
SFPQP23246 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.723e-7■■■□□ 18.5
SFPQP23246 UBE2G1-203ENST00000571980 984 ntTSL 523.76■■□□□ 1.391e-7■■■□□ 18.4
SFPQP23246 UBE2G1-206ENST00000574633 863 ntTSL 222.72■■□□□ 1.231e-7■■■□□ 18.4
SFPQP23246 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.875e-7■■■□□ 18.4
SFPQP23246 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.86■□□□□ 0.611e-7■■■□□ 18.4
SFPQP23246 UBE2O-202ENST00000586409 3579 ntTSL 218.3■□□□□ 0.525e-7■■■□□ 18.4
SFPQP23246 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.121e-7■■■□□ 18.4
SFPQP23246 UBE2G1-205ENST00000574059 569 ntTSL 45.58□□□□□ -1.521e-7■■■□□ 18.4
SFPQP23246 BLCAP-207ENST00000414080 581 ntTSL 324.64■■□□□ 1.541e-6■■■□□ 18.3
SFPQP23246 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.311e-6■■■□□ 18.3
SFPQP23246 BLCAP-210ENST00000445723 588 ntTSL 420.79■□□□□ 0.921e-6■■■□□ 18.3
SFPQP23246 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.781e-6■■■□□ 18.3
SFPQP23246 BLCAP-213ENST00000467603 439 ntTSL 317.32■□□□□ 0.361e-6■■■□□ 18.3
SFPQP23246 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.251e-6■■■□□ 18.3
SFPQP23246 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.21e-6■■■□□ 18.3
SFPQP23246 L3MBTL4-205ENST00000580162 457 ntTSL 319.5■□□□□ 0.712e-6■■■□□ 18.3
SFPQP23246 SMAD3-212ENST00000559937 579 ntTSL 49.22□□□□□ -0.931e-6■■■□□ 18.3
SFPQP23246 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.533e-6■■■□□ 18.3
SFPQP23246 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC15.8■□□□□ 0.128e-7■■■□□ 18.3
SFPQP23246 MTUS1-225ENST00000523718 3354 ntTSL 1 (best)13.64□□□□□ -0.238e-7■■■□□ 18.3
SFPQP23246 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.86□□□□□ -1.478e-7■■■□□ 18.3
SFPQP23246 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.22■□□□□ 0.352e-6■■■□□ 18.3
SFPQP23246 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.082e-6■■■□□ 18.3
SFPQP23246 BRD1-204ENST00000438393 3051 ntTSL 215.03■□□□□ -02e-6■■■□□ 18.3
SFPQP23246 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.122e-6■■■□□ 18.3
SFPQP23246 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC13.77□□□□□ -0.212e-6■■■□□ 18.3
SFPQP23246 VAV2-204ENST00000472905 506 ntTSL 318.51■□□□□ 0.552e-6■■■□□ 18.3
SFPQP23246 VGLL4-206ENST00000418000 792 ntTSL 328.15■■■□□ 2.13e-6■■■□□ 18.3
SFPQP23246 VGLL4-205ENST00000417466 894 ntTSL 325.13■■□□□ 1.613e-6■■■□□ 18.3
SFPQP23246 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.8■□□□□ 0.763e-6■■■□□ 18.3
SFPQP23246 VGLL4-204ENST00000417206 581 ntTSL 419.8■□□□□ 0.763e-6■■■□□ 18.3
SFPQP23246 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.593e-6■■■□□ 18.3
SFPQP23246 VGLL4-207ENST00000419541 466 ntTSL 315.59■□□□□ 0.093e-6■■■□□ 18.3
SFPQP23246 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC13.65□□□□□ -0.223e-6■■■□□ 18.3
SFPQP23246 VGLL4-213ENST00000445411 726 ntTSL 510.53□□□□□ -0.723e-6■■■□□ 18.3
SFPQP23246 EIPR1-212ENST00000478754 2932 ntTSL 518.85■□□□□ 0.613e-6■■■□□ 18.3
SFPQP23246 PHYHIPL-204ENST00000486074 1971 ntTSL 210.52□□□□□ -0.722e-7■■■□□ 18.3
SFPQP23246 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-7■■■□□ 18.3
SFPQP23246 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.55□□□□□ -1.22e-7■■■□□ 18.3
SFPQP23246 BSG-209ENST00000574970 570 ntTSL 424.23■■□□□ 1.478e-7■■■□□ 18.2
SFPQP23246 BSG-208ENST00000573784 559 ntTSL 421.34■■□□□ 1.018e-7■■■□□ 18.2
SFPQP23246 BSG-211ENST00000576984 544 ntTSL 420.8■□□□□ 0.928e-7■■■□□ 18.2
SFPQP23246 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.193e-7■■■□□ 18.2
SFPQP23246 TAF4-203ENST00000474089 532 ntTSL 221.83■■□□□ 1.092e-6■■■□□ 18.1
SFPQP23246 TAF4-202ENST00000436129 2440 ntTSL 217.8■□□□□ 0.442e-6■■■□□ 18.1
SFPQP23246 CHD9-217ENST00000565832 2169 ntTSL 1 (best)6.87□□□□□ -1.314e-6■■■□□ 18.1
SFPQP23246 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.33□□□□□ -1.564e-6■■■□□ 18.1
SFPQP23246 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.834e-6■■■□□ 18.1
SFPQP23246 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.39□□□□□ -1.874e-6■■■□□ 18.1
SFPQP23246 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.884e-6■■■□□ 18.1
SFPQP23246 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.491e-6■■■□□ 18.1
SFPQP23246 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.121e-6■■■□□ 18.1
SFPQP23246 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.061e-6■■■□□ 18.1
SFPQP23246 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.966e-6■■■□□ 18.1
SFPQP23246 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.786e-6■■■□□ 18.1
SFPQP23246 RABL6-210ENST00000484471 2746 ntTSL 523.01■■□□□ 1.276e-6■■■□□ 18.1
Retrieved 100 of 4,991 protein–RNA pairs in 121.4 ms