Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSN3P07498 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSN3P07498 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSN3P07498 AL359258.2-201ENST00000564063 1566 ntBASIC18.92■□□□□ 0.62
CSN3P07498 RNF126P1-201ENST00000567452 1320 ntBASIC18.92■□□□□ 0.62
CSN3P07498 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSN3P07498 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSN3P07498 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSN3P07498 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSN3P07498 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSN3P07498 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSN3P07498 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CSN3P07498 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.9■□□□□ 0.62
CSN3P07498 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CSN3P07498 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CSN3P07498 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSN3P07498 LINC01003-201ENST00000564834 1764 ntBASIC18.9■□□□□ 0.62
CSN3P07498 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSN3P07498 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CSN3P07498 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CSN3P07498 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.89■□□□□ 0.61
CSN3P07498 RARRES2P2-201ENST00000394842 485 ntBASIC18.89■□□□□ 0.61
CSN3P07498 AC092296.2-201ENST00000589470 999 ntBASIC18.89■□□□□ 0.61
CSN3P07498 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.89■□□□□ 0.61
CSN3P07498 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.89■□□□□ 0.61
CSN3P07498 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSN3P07498 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.88■□□□□ 0.61
CSN3P07498 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSN3P07498 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSN3P07498 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSN3P07498 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSN3P07498 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CSN3P07498 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSN3P07498 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CSN3P07498 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.86■□□□□ 0.61
CSN3P07498 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSN3P07498 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSN3P07498 BX255925.1-201ENST00000566954 1854 ntBASIC18.86■□□□□ 0.61
CSN3P07498 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CSN3P07498 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSN3P07498 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSN3P07498 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.85■□□□□ 0.61
CSN3P07498 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSN3P07498 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSN3P07498 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.85■□□□□ 0.61
CSN3P07498 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSN3P07498 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.84■□□□□ 0.61
CSN3P07498 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CSN3P07498 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSN3P07498 ECEL1P2-201ENST00000461596 1295 ntBASIC18.84■□□□□ 0.61
CSN3P07498 AL157400.5-201ENST00000507624 621 ntBASIC18.84■□□□□ 0.61
CSN3P07498 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSN3P07498 WHAMMP3-201ENST00000611636 1609 ntBASIC18.84■□□□□ 0.61
CSN3P07498 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CSN3P07498 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSN3P07498 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSN3P07498 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSN3P07498 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSN3P07498 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSN3P07498 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.82■□□□□ 0.6
CSN3P07498 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSN3P07498 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSN3P07498 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.82■□□□□ 0.6
CSN3P07498 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.81■□□□□ 0.6
CSN3P07498 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSN3P07498 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSN3P07498 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSN3P07498 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CSN3P07498 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSN3P07498 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSN3P07498 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
CSN3P07498 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CSN3P07498 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.8■□□□□ 0.6
CSN3P07498 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSN3P07498 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.8■□□□□ 0.6
CSN3P07498 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSN3P07498 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSN3P07498 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.8■□□□□ 0.6
CSN3P07498 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSN3P07498 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSN3P07498 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CSN3P07498 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSN3P07498 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSN3P07498 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.79■□□□□ 0.6
CSN3P07498 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.79■□□□□ 0.6
CSN3P07498 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.79■□□□□ 0.6
CSN3P07498 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
CSN3P07498 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.79■□□□□ 0.6
CSN3P07498 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSN3P07498 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CSN3P07498 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSN3P07498 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSN3P07498 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSN3P07498 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSN3P07498 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSN3P07498 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSN3P07498 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CSN3P07498 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSN3P07498 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.77■□□□□ 0.6
CSN3P07498 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms