Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIX6O95475 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIX6O95475 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX6O95475 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX6O95475 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.3■□□□□ 0.84
SIX6O95475 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX6O95475 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX6O95475 AC010501.1-201ENST00000606270 1962 ntBASIC20.29■□□□□ 0.84
SIX6O95475 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SIX6O95475 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.29■□□□□ 0.84
SIX6O95475 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.29■□□□□ 0.84
SIX6O95475 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX6O95475 AC142472.1-201ENST00000612013 1741 ntBASIC20.29■□□□□ 0.84
SIX6O95475 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX6O95475 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX6O95475 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIX6O95475 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.28■□□□□ 0.84
SIX6O95475 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIX6O95475 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SIX6O95475 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIX6O95475 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX6O95475 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX6O95475 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIX6O95475 AC079834.2-201ENST00000609776 1949 ntBASIC20.27■□□□□ 0.84
SIX6O95475 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX6O95475 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.26■□□□□ 0.83
SIX6O95475 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.26■□□□□ 0.83
SIX6O95475 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.26■□□□□ 0.83
SIX6O95475 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX6O95475 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.26■□□□□ 0.83
SIX6O95475 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX6O95475 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX6O95475 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SIX6O95475 LINC00543-201ENST00000567234 1845 ntBASIC20.25■□□□□ 0.83
SIX6O95475 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX6O95475 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX6O95475 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX6O95475 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX6O95475 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SIX6O95475 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX6O95475 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX6O95475 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.24■□□□□ 0.83
SIX6O95475 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX6O95475 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX6O95475 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX6O95475 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX6O95475 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX6O95475 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX6O95475 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX6O95475 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX6O95475 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX6O95475 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SIX6O95475 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX6O95475 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SIX6O95475 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
SIX6O95475 AC135983.2-203ENST00000454486 1613 ntBASIC20.23■□□□□ 0.83
SIX6O95475 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX6O95475 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX6O95475 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX6O95475 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX6O95475 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX6O95475 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SIX6O95475 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
SIX6O95475 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.21■□□□□ 0.83
SIX6O95475 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SIX6O95475 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.21■□□□□ 0.83
SIX6O95475 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX6O95475 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SIX6O95475 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.2■□□□□ 0.82
SIX6O95475 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SIX6O95475 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX6O95475 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX6O95475 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX6O95475 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.19■□□□□ 0.82
SIX6O95475 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX6O95475 WHAMMP2-203ENST00000563942 1603 ntBASIC20.19■□□□□ 0.82
SIX6O95475 LINC01124-201ENST00000409786 2117 ntBASIC20.18■□□□□ 0.82
SIX6O95475 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX6O95475 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.18■□□□□ 0.82
SIX6O95475 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.18■□□□□ 0.82
SIX6O95475 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SIX6O95475 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIX6O95475 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms