Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDRT1O95170 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.58■■□□□ 1.05
CDRT1O95170 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDRT1O95170 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDRT1O95170 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDRT1O95170 AC138932.3-201ENST00000567634 1902 ntBASIC21.58■■□□□ 1.04
CDRT1O95170 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDRT1O95170 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDRT1O95170 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDRT1O95170 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CDRT1O95170 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDRT1O95170 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.57■■□□□ 1.04
CDRT1O95170 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CDRT1O95170 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDRT1O95170 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDRT1O95170 DUX4L28-201ENST00000623687 678 ntBASIC21.57■■□□□ 1.04
CDRT1O95170 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
CDRT1O95170 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CDRT1O95170 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDRT1O95170 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDRT1O95170 AC010501.1-201ENST00000606270 1962 ntBASIC21.56■■□□□ 1.04
CDRT1O95170 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDRT1O95170 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDRT1O95170 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDRT1O95170 AC022211.4-201ENST00000625094 2161 ntBASIC21.55■■□□□ 1.04
CDRT1O95170 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.55■■□□□ 1.04
CDRT1O95170 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDRT1O95170 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDRT1O95170 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDRT1O95170 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDRT1O95170 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.55■■□□□ 1.04
CDRT1O95170 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
CDRT1O95170 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDRT1O95170 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDRT1O95170 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDRT1O95170 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDRT1O95170 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDRT1O95170 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDRT1O95170 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDRT1O95170 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.53■■□□□ 1.04
CDRT1O95170 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDRT1O95170 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.53■■□□□ 1.04
CDRT1O95170 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDRT1O95170 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDRT1O95170 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDRT1O95170 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDRT1O95170 LINC00273-201ENST00000539813 1452 ntBASIC21.52■■□□□ 1.04
CDRT1O95170 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDRT1O95170 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDRT1O95170 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDRT1O95170 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDRT1O95170 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.51■■□□□ 1.03
CDRT1O95170 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDRT1O95170 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDRT1O95170 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CDRT1O95170 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDRT1O95170 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDRT1O95170 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDRT1O95170 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDRT1O95170 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDRT1O95170 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.5■■□□□ 1.03
CDRT1O95170 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDRT1O95170 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDRT1O95170 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDRT1O95170 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.49■■□□□ 1.03
CDRT1O95170 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
CDRT1O95170 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.49■■□□□ 1.03
CDRT1O95170 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDRT1O95170 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDRT1O95170 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDRT1O95170 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDRT1O95170 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT1O95170 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT1O95170 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT1O95170 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT1O95170 MIR3665-201ENST00000578708 105 ntBASIC21.48■■□□□ 1.03
CDRT1O95170 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CDRT1O95170 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT1O95170 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT1O95170 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDRT1O95170 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT1O95170 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT1O95170 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT1O95170 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT1O95170 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT1O95170 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDRT1O95170 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT1O95170 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDRT1O95170 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.47■■□□□ 1.03
CDRT1O95170 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.46■■□□□ 1.03
CDRT1O95170 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT1O95170 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDRT1O95170 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT1O95170 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT1O95170 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT1O95170 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.46■■□□□ 1.03
CDRT1O95170 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT1O95170 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT1O95170 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDRT1O95170 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms