Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
UPK1BO75841 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.31■■□□□ 1
UPK1BO75841 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.31■■□□□ 1
UPK1BO75841 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UPK1BO75841 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPK1BO75841 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPK1BO75841 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UPK1BO75841 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPK1BO75841 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPK1BO75841 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK1BO75841 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
UPK1BO75841 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK1BO75841 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
UPK1BO75841 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPK1BO75841 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK1BO75841 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.3■■□□□ 1
UPK1BO75841 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK1BO75841 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
UPK1BO75841 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK1BO75841 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
UPK1BO75841 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK1BO75841 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPK1BO75841 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPK1BO75841 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
UPK1BO75841 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UPK1BO75841 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPK1BO75841 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
UPK1BO75841 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
UPK1BO75841 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPK1BO75841 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
UPK1BO75841 DUSP8P5-201ENST00000422884 1815 ntBASIC21.27■■□□□ 1
UPK1BO75841 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UPK1BO75841 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
UPK1BO75841 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.27■■□□□ 1
UPK1BO75841 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
UPK1BO75841 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
UPK1BO75841 LINC01124-201ENST00000409786 2117 ntBASIC21.26■□□□□ 0.99
UPK1BO75841 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UPK1BO75841 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UPK1BO75841 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.26■□□□□ 0.99
UPK1BO75841 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.26■□□□□ 0.99
UPK1BO75841 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
UPK1BO75841 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UPK1BO75841 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UPK1BO75841 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UPK1BO75841 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UPK1BO75841 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UPK1BO75841 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.24■□□□□ 0.99
UPK1BO75841 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UPK1BO75841 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.24■□□□□ 0.99
UPK1BO75841 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
UPK1BO75841 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.23■□□□□ 0.99
UPK1BO75841 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.23■□□□□ 0.99
UPK1BO75841 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
UPK1BO75841 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPK1BO75841 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPK1BO75841 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPK1BO75841 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPK1BO75841 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPK1BO75841 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPK1BO75841 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPK1BO75841 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPK1BO75841 AC142472.1-201ENST00000612013 1741 ntBASIC21.22■□□□□ 0.99
UPK1BO75841 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPK1BO75841 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.22■□□□□ 0.99
UPK1BO75841 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.22■□□□□ 0.99
UPK1BO75841 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPK1BO75841 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPK1BO75841 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPK1BO75841 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.21■□□□□ 0.99
UPK1BO75841 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPK1BO75841 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPK1BO75841 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPK1BO75841 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPK1BO75841 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPK1BO75841 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.21■□□□□ 0.99
UPK1BO75841 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPK1BO75841 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
UPK1BO75841 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.21■□□□□ 0.99
UPK1BO75841 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
UPK1BO75841 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPK1BO75841 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPK1BO75841 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPK1BO75841 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.19■□□□□ 0.98
UPK1BO75841 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.19■□□□□ 0.98
UPK1BO75841 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.19■□□□□ 0.98
UPK1BO75841 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.19■□□□□ 0.98
UPK1BO75841 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UPK1BO75841 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK1BO75841 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
UPK1BO75841 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPK1BO75841 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UPK1BO75841 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms