Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV5A0A0B4J249 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV5A0A0B4J249 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV5A0A0B4J249 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV5A0A0B4J249 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV5A0A0B4J249 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV5A0A0B4J249 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAV5A0A0B4J249 AC021231.2-201ENST00000594613 730 ntBASIC18.79■□□□□ 0.6
TRAV5A0A0B4J249 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV5A0A0B4J249 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV5A0A0B4J249 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV5A0A0B4J249 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 AC138932.3-201ENST00000567634 1902 ntBASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 AC022211.4-201ENST00000625094 2161 ntBASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV5A0A0B4J249 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV5A0A0B4J249 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV5A0A0B4J249 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV5A0A0B4J249 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRAV5A0A0B4J249 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV5A0A0B4J249 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV5A0A0B4J249 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 AL162393.1-201ENST00000437852 946 ntBASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 AC044849.2-201ENST00000606596 710 ntBASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRAV5A0A0B4J249 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV5A0A0B4J249 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAV5A0A0B4J249 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRAV5A0A0B4J249 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV5A0A0B4J249 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV5A0A0B4J249 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV5A0A0B4J249 AL139125.2-201ENST00000623134 1869 ntBASIC18.72■□□□□ 0.59
TRAV5A0A0B4J249 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV5A0A0B4J249 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV5A0A0B4J249 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV5A0A0B4J249 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 AC096887.2-201ENST00000623443 1957 ntBASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRAV5A0A0B4J249 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRAV5A0A0B4J249 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 DUX4L29-201ENST00000425409 679 ntBASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV5A0A0B4J249 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms