Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-8A0A0A6YYG3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-8A0A0A6YYG3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TRBV6-8A0A0A6YYG3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-8A0A0A6YYG3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRBV6-8A0A0A6YYG3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-8A0A0A6YYG3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-8A0A0A6YYG3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-8A0A0A6YYG3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-8A0A0A6YYG3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-8A0A0A6YYG3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-8A0A0A6YYG3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.89■□□□□ 0.3
TRBV6-8A0A0A6YYG3 AC010501.1-201ENST00000606270 1962 ntBASIC16.89■□□□□ 0.3
TRBV6-8A0A0A6YYG3 AC020928.2-201ENST00000588717 2197 ntBASIC16.89■□□□□ 0.3
TRBV6-8A0A0A6YYG3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV6-8A0A0A6YYG3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV6-8A0A0A6YYG3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRBV6-8A0A0A6YYG3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 AL359504.2-201ENST00000605506 1601 ntBASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-8A0A0A6YYG3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-8A0A0A6YYG3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-8A0A0A6YYG3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-8A0A0A6YYG3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-8A0A0A6YYG3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 ERN1-208ENST00000606895 2068 ntBASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 AC016575.1-201ENST00000607026 382 ntBASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-8A0A0A6YYG3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-8A0A0A6YYG3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-8A0A0A6YYG3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.83■□□□□ 0.29
TRBV6-8A0A0A6YYG3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-8A0A0A6YYG3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-8A0A0A6YYG3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-8A0A0A6YYG3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBV6-8A0A0A6YYG3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-8A0A0A6YYG3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.83■□□□□ 0.28
TRBV6-8A0A0A6YYG3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.83■□□□□ 0.28
TRBV6-8A0A0A6YYG3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-8A0A0A6YYG3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRBV6-8A0A0A6YYG3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-8A0A0A6YYG3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-8A0A0A6YYG3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-8A0A0A6YYG3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-8A0A0A6YYG3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBV6-8A0A0A6YYG3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV6-8A0A0A6YYG3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-8A0A0A6YYG3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-8A0A0A6YYG3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-8A0A0A6YYG3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-8A0A0A6YYG3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TRBV6-8A0A0A6YYG3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-8A0A0A6YYG3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-8A0A0A6YYG3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRBV6-8A0A0A6YYG3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRBV6-8A0A0A6YYG3 MIR7108-201ENST00000614319 87 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms