Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 ADAMTS7P1-201ENST00000613213 4793 ntBASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 KRT16P2-201ENST00000414673 1423 ntBASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01558Q9Y6Z2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 AC107918.4-201ENST00000641966 3141 ntBASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 HYI-210ENST00000486909 905 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 AC022413.1-201ENST00000624602 984 ntBASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 RHBDF1P1-201ENST00000427504 1941 ntBASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 PTENP1-202ENST00000532280 3996 ntBASIC9.03□□□□□ -0.96
LINC01558Q9Y6Z2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01558Q9Y6Z2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01558Q9Y6Z2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms