Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 AC112482.1-201ENST00000492080 688 ntBASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 IGHV3-52-201ENST00000519770 353 ntBASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 AC109462.3-201ENST00000573934 613 ntBASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 STK25P1-201ENST00000585406 838 ntBASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 AC010327.4-202ENST00000591484 748 ntBASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 AC055717.3-201ENST00000622967 595 ntBASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1G3Q9Y6M4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 AC079781.4-201ENST00000641908 219 ntBASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.12■□□□□ 0.33
CSNK1G3Q9Y6M4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 AC148477.5-201ENST00000625164 1645 ntBASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 CRYGEP-201ENST00000412192 528 ntBASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 ELK2BP-201ENST00000415014 1224 ntBASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 PRSS29P-201ENST00000440800 595 ntBASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 AC008667.4-201ENST00000607370 168 ntBASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 AC006504.4-201ENST00000592118 1568 ntBASIC17.11■□□□□ 0.33
CSNK1G3Q9Y6M4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms