Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 AL627223.1-201ENST00000416693 442 ntBASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 AC009093.7-201ENST00000623853 1223 ntBASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCFC2Q9Y5Z7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AC002056.1-201ENST00000395613 760 ntBASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 MIR4745-201ENST00000577608 62 ntBASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AC138761.1-201ENST00000584393 385 ntBASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AC015911.4-201ENST00000588022 1070 ntBASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AC026120.1-201ENST00000611536 926 ntBASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HCFC2Q9Y5Z7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HCFC2Q9Y5Z7 AL355306.1-201ENST00000415580 579 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms