Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHTOPQ9Y3Y2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 LINC02199-201ENST00000506655 2702 ntBASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 AC067930.6-201ENST00000623257 4947 ntBASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 AL603756.1-201ENST00000606511 2163 ntBASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.62□□□□□ -0.39
CHTOPQ9Y3Y2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms