Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 DAD1-205ENST00000543337 501 ntTSL 3 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 RPL28-209ENST00000560055 670 ntTSL 3 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 IGHV3OR16-6-201ENST00000568775 360 ntBASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC26.87■■□□□ 1.89
CDK11AQ9UQ88 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 AC002056.1-201ENST00000395613 760 ntBASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 NMU-203ENST00000507338 658 ntTSL 3 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDK11AQ9UQ88 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 SLC25A6P2-201ENST00000497974 877 ntBASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 AL096865.1-201ENST00000606796 927 ntBASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
CDK11AQ9UQ88 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 AC087163.2-201ENST00000457299 853 ntBASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 GATB-205ENST00000508611 605 ntTSL 2 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 AC093512.1-201ENST00000617969 520 ntBASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDK11AQ9UQ88 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms