Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 AC016396.2-201ENST00000562575 1417 ntBASIC20■□□□□ 0.79
PCDHA4Q9UN74 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
PCDHA4Q9UN74 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHA4Q9UN74 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 EMBP1-201ENST00000458200 901 ntBASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHA4Q9UN74 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 SIGLEC30P-201ENST00000455569 941 ntBASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA4Q9UN74 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 AL135999.2-201ENST00000622438 1686 ntBASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 NKAPP1-205ENST00000585790 367 ntBASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 AL139288.1-201ENST00000623748 933 ntBASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 AL356309.3-201ENST00000624132 1934 ntBASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA4Q9UN74 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms