Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNPO2Q9UMS6 AC129492.6-201ENST00000611383 1305 ntBASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 FAM185BP-201ENST00000443595 716 ntBASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 AC112482.1-201ENST00000492080 688 ntBASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 CXCL1P1-201ENST00000502804 216 ntBASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 AC010327.4-202ENST00000591484 748 ntBASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNPO2Q9UMS6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 AC016396.2-201ENST00000562575 1417 ntBASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 MKNK2P1-201ENST00000437526 628 ntBASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 AC087163.2-201ENST00000457299 853 ntBASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 C20orf181-201ENST00000623918 480 ntBASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 AC007064.4-201ENST00000637740 555 ntBASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SYNPO2Q9UMS6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 AC092865.6-201ENST00000642101 219 ntBASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SYNPO2Q9UMS6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.02■□□□□ 0.79
SYNPO2Q9UMS6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNPO2Q9UMS6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SYNPO2Q9UMS6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNPO2Q9UMS6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 KRT19P2-202ENST00000557173 1012 ntBASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 AC018845.2-201ENST00000568326 409 ntBASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 AC023141.13-201ENST00000604991 943 ntBASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPO2Q9UMS6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms