Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 AC107918.4-202ENST00000641623 219 ntBASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HDAC6Q9UBN7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 AC105339.3-201ENST00000560043 636 ntBASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 AL356488.2-201ENST00000602755 427 ntBASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 AP002414.3-201ENST00000589352 1468 ntBASIC19.79■□□□□ 0.76
HDAC6Q9UBN7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 AC010460.3-201ENST00000511359 1579 ntBASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 REXO1L9P-201ENST00000604264 2108 ntBASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 BX005266.1-201ENST00000473402 457 ntBASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 Z83851.2-201ENST00000609564 659 ntBASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 AC138028.4-201ENST00000564984 1845 ntBASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.78■□□□□ 0.76
HDAC6Q9UBN7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 AC096633.1-201ENST00000422446 749 ntBASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 MED15P5-201ENST00000423150 992 ntBASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 FAM197Y3-203ENST00000618346 717 ntBASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC6Q9UBN7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms