Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 AC004832.2-201ENST00000426397 482 ntBASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 AC112482.1-201ENST00000492080 688 ntBASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 MIR4751-201ENST00000578027 74 ntBASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LRIT1Q9P2V4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 AC108073.2-201ENST00000464002 357 ntBASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 IGHV3-65-201ENST00000523210 341 ntBASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 AC008667.4-201ENST00000607370 168 ntBASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 AL354751.1-201ENST00000412768 1863 ntBASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIT1Q9P2V4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRIT1Q9P2V4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRIT1Q9P2V4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
LRIT1Q9P2V4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 AL390961.4-201ENST00000623958 2535 ntBASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 KRT18P2-201ENST00000447938 1258 ntBASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 MTDHP5-201ENST00000598980 586 ntBASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms