Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 RPSAP43-201ENST00000402237 625 ntBASIC19.73■□□□□ 0.75
COL20A1Q9P218 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 CRYGEP-201ENST00000412192 528 ntBASIC19.73■□□□□ 0.75
COL20A1Q9P218 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 GPX1P2-201ENST00000429271 606 ntBASIC19.73■□□□□ 0.75
COL20A1Q9P218 PRSS29P-201ENST00000440800 595 ntBASIC19.73■□□□□ 0.75
COL20A1Q9P218 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.73■□□□□ 0.75
COL20A1Q9P218 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL20A1Q9P218 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL20A1Q9P218 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL20A1Q9P218 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 UPF3AP3-201ENST00000420996 769 ntBASIC19.72■□□□□ 0.75
COL20A1Q9P218 AC004832.2-201ENST00000426397 482 ntBASIC19.72■□□□□ 0.75
COL20A1Q9P218 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 AC112482.1-201ENST00000492080 688 ntBASIC19.72■□□□□ 0.75
COL20A1Q9P218 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL20A1Q9P218 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL20A1Q9P218 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL20A1Q9P218 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.72■□□□□ 0.75
COL20A1Q9P218 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL20A1Q9P218 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.71■□□□□ 0.75
COL20A1Q9P218 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.71■□□□□ 0.75
COL20A1Q9P218 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL20A1Q9P218 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 AC007613.1-201ENST00000572811 2597 ntBASIC19.7■□□□□ 0.74
COL20A1Q9P218 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 AL513190.1-201ENST00000621254 727 ntBASIC19.7■□□□□ 0.74
COL20A1Q9P218 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL20A1Q9P218 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.7■□□□□ 0.74
COL20A1Q9P218 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms