Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 AC005104.2-201ENST00000427818 678 ntBASIC17.76■□□□□ 0.43
HACD3Q9P035 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.76■□□□□ 0.43
HACD3Q9P035 AC074051.2-201ENST00000565115 352 ntBASIC17.76■□□□□ 0.43
HACD3Q9P035 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.76■□□□□ 0.43
HACD3Q9P035 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HACD3Q9P035 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 NSUN5P1-202ENST00000421140 1535 ntBASIC17.76■□□□□ 0.43
HACD3Q9P035 NSUN5P2-203ENST00000457352 1529 ntBASIC17.76■□□□□ 0.43
HACD3Q9P035 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.76■□□□□ 0.43
HACD3Q9P035 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.76■□□□□ 0.43
HACD3Q9P035 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HACD3Q9P035 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HACD3Q9P035 HLA-J-201ENST00000462773 1622 ntBASIC17.76■□□□□ 0.43
HACD3Q9P035 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 LINC00304-203ENST00000565008 1864 ntBASIC17.75■□□□□ 0.43
HACD3Q9P035 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.75■□□□□ 0.43
HACD3Q9P035 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HACD3Q9P035 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HACD3Q9P035 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
HACD3Q9P035 IGHV3-47-201ENST00000425060 335 ntBASIC17.75■□□□□ 0.43
HACD3Q9P035 AP000867.3-201ENST00000524675 377 ntBASIC17.75■□□□□ 0.43
HACD3Q9P035 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HACD3Q9P035 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HACD3Q9P035 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HACD3Q9P035 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HACD3Q9P035 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HACD3Q9P035 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.75■□□□□ 0.43
HACD3Q9P035 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HACD3Q9P035 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.74■□□□□ 0.43
HACD3Q9P035 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.74■□□□□ 0.43
HACD3Q9P035 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.74■□□□□ 0.43
HACD3Q9P035 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HACD3Q9P035 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.74■□□□□ 0.43
HACD3Q9P035 POM121L3P-201ENST00000419331 1163 ntBASIC17.74■□□□□ 0.43
HACD3Q9P035 AC103564.2-201ENST00000432853 1299 ntBASIC17.74■□□□□ 0.43
HACD3Q9P035 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HACD3Q9P035 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 AC002558.1-201ENST00000488906 803 ntBASIC17.74■□□□□ 0.43
HACD3Q9P035 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.74■□□□□ 0.43
HACD3Q9P035 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.74■□□□□ 0.43
HACD3Q9P035 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HACD3Q9P035 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.74■□□□□ 0.43
HACD3Q9P035 AC011467.2-201ENST00000598425 242 ntBASIC17.74■□□□□ 0.43
HACD3Q9P035 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 REXO1L11P-201ENST00000620964 1927 ntBASIC17.74■□□□□ 0.43
HACD3Q9P035 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
HACD3Q9P035 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
HACD3Q9P035 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HACD3Q9P035 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.74■□□□□ 0.43
HACD3Q9P035 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HACD3Q9P035 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HACD3Q9P035 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HACD3Q9P035 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HACD3Q9P035 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
HACD3Q9P035 AL355312.1-201ENST00000407115 2176 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms