Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CDC42SE1Q9NRR8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 TCAF1P1-201ENST00000414990 2232 ntBASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 AC027612.1-201ENST00000445234 2395 ntBASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 AL592293.1-201ENST00000502889 1188 ntBASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 HSPA7-201ENST00000445535 1927 ntBASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 AC006486.2-201ENST00000624246 2199 ntBASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
CDC42SE1Q9NRR8 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 POM121L4P-202ENST00000427789 1891 ntBASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CDC42SE1Q9NRR8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms