Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 PRYP5-201ENST00000451909 266 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 LINC00896-202ENST00000609602 2128 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 PMS2P7-201ENST00000506558 1336 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 AL020989.1-201ENST00000422979 469 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 AC006557.2-201ENST00000592985 1240 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 AC055717.3-201ENST00000622967 595 ntBASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KIAA1549Q9HCM3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 ZNF259P1-201ENST00000407656 1365 ntBASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 YBX2P1-201ENST00000394192 760 ntBASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 KRT18P13-201ENST00000400056 1290 ntBASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 AC023274.1-201ENST00000418278 595 ntBASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 AC087163.2-201ENST00000457299 853 ntBASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 AC046185.3-201ENST00000623228 1824 ntBASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 CROCCP2-202ENST00000412962 2773 ntBASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.54■□□□□ 0.08
KIAA1549Q9HCM3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 KRT18P2-201ENST00000447938 1258 ntBASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 FAM197Y3-203ENST00000618346 717 ntBASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
KIAA1549Q9HCM3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms