Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 FAM197Y8-203ENST00000450145 560 ntBASIC20.65■□□□□ 0.9
RNF41Q9H4P4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 AC073648.2-201ENST00000510116 352 ntBASIC20.65■□□□□ 0.9
RNF41Q9H4P4 AP002469.2-201ENST00000531724 424 ntBASIC20.65■□□□□ 0.9
RNF41Q9H4P4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 AC064862.7-201ENST00000604520 867 ntBASIC20.65■□□□□ 0.9
RNF41Q9H4P4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RNF41Q9H4P4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF41Q9H4P4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 AF186996.4-201ENST00000467186 377 ntBASIC20.64■□□□□ 0.89
RNF41Q9H4P4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF41Q9H4P4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 KRT18P67-201ENST00000432816 1264 ntBASIC20.63■□□□□ 0.89
RNF41Q9H4P4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 AC021087.4-201ENST00000563761 564 ntBASIC20.63■□□□□ 0.89
RNF41Q9H4P4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF41Q9H4P4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 RNPS1P1-201ENST00000507437 918 ntBASIC20.62■□□□□ 0.89
RNF41Q9H4P4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 MTDHP4-201ENST00000600287 670 ntBASIC20.62■□□□□ 0.89
RNF41Q9H4P4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF41Q9H4P4 LINC00896-202ENST00000609602 2128 ntBASIC20.62■□□□□ 0.89
RNF41Q9H4P4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms