Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VCX3BQ9H321 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VCX3BQ9H321 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
VCX3BQ9H321 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 NTF6G-201ENST00000591094 616 ntBASIC16.7■□□□□ 0.26
VCX3BQ9H321 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 LYSMD4-203ENST00000378904 2122 ntBASIC16.7■□□□□ 0.26
VCX3BQ9H321 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VCX3BQ9H321 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.7■□□□□ 0.26
VCX3BQ9H321 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 AL662844.4-201ENST00000606367 2838 ntBASIC16.69■□□□□ 0.26
VCX3BQ9H321 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCX3BQ9H321 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.69■□□□□ 0.26
VCX3BQ9H321 AC120498.8-201ENST00000614275 531 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms