Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 AC009113.1-201ENST00000570267 2443 ntBASIC21.13■□□□□ 0.97
RTFDC1Q9BY42 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 AL355306.1-201ENST00000415580 579 ntBASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 AC026120.1-201ENST00000611536 926 ntBASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.12■□□□□ 0.97
RTFDC1Q9BY42 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 AC104581.1-202ENST00000635932 2618 ntBASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 AC129492.6-201ENST00000611383 1305 ntBASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 AC138761.1-201ENST00000584393 385 ntBASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 AL135999.2-201ENST00000622438 1686 ntBASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.11■□□□□ 0.97
RTFDC1Q9BY42 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 FAM86GP-201ENST00000448322 971 ntBASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 MIR4745-201ENST00000577608 62 ntBASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTFDC1Q9BY42 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms