Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.79■□□□□ 0.28
THUMPD3Q9BV44 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 TERF1P1-201ENST00000311003 1181 ntBASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 AC113404.2-201ENST00000507884 177 ntBASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 AC140113.3-201ENST00000605663 199 ntBASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 AL157888.1-201ENST00000631930 593 ntBASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
THUMPD3Q9BV44 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 AC005521.1-201ENST00000393351 872 ntBASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 AL023973.1-201ENST00000624619 620 ntBASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THUMPD3Q9BV44 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THUMPD3Q9BV44 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 AL118508.1-201ENST00000613502 2345 ntBASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THUMPD3Q9BV44 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms