Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLF1Q9BQI6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF1Q9BQI6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.36■□□□□ 0.85
SLF1Q9BQI6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 AC009947.1-201ENST00000444350 727 ntBASIC20.35■□□□□ 0.85
SLF1Q9BQI6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 PGM5P2-202ENST00000637225 1043 ntBASIC20.35■□□□□ 0.85
SLF1Q9BQI6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF1Q9BQI6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 KRT18P3-201ENST00000451602 1288 ntBASIC20.34■□□□□ 0.85
SLF1Q9BQI6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 AC136632.2-201ENST00000512891 861 ntBASIC20.34■□□□□ 0.85
SLF1Q9BQI6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 AC005593.1-201ENST00000624894 515 ntBASIC20.34■□□□□ 0.85
SLF1Q9BQI6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLF1Q9BQI6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 AC090340.1-201ENST00000620778 4980 ntBASIC20.33■□□□□ 0.85
SLF1Q9BQI6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.33■□□□□ 0.85
SLF1Q9BQI6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.33■□□□□ 0.84
SLF1Q9BQI6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 MIR1233-2-201ENST00000408138 82 ntBASIC20.32■□□□□ 0.84
SLF1Q9BQI6 MIR1233-1-201ENST00000408722 82 ntBASIC20.32■□□□□ 0.84
SLF1Q9BQI6 SIGLEC30P-201ENST00000455569 941 ntBASIC20.32■□□□□ 0.84
SLF1Q9BQI6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SLF1Q9BQI6 AC004706.3-202ENST00000621574 984 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms