Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VGLL1Q99990 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VGLL1Q99990 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
VGLL1Q99990 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VGLL1Q99990 KRT18P65-201ENST00000439811 1286 ntBASIC13.32□□□□□ -0.28
VGLL1Q99990 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
VGLL1Q99990 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.32□□□□□ -0.28
VGLL1Q99990 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.32□□□□□ -0.28
VGLL1Q99990 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VGLL1Q99990 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VGLL1Q99990 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
VGLL1Q99990 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.31□□□□□ -0.28
VGLL1Q99990 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.31□□□□□ -0.28
VGLL1Q99990 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
VGLL1Q99990 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.31□□□□□ -0.28
VGLL1Q99990 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VGLL1Q99990 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VGLL1Q99990 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.3□□□□□ -0.28
VGLL1Q99990 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
VGLL1Q99990 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.3□□□□□ -0.28
VGLL1Q99990 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
VGLL1Q99990 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VGLL1Q99990 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.3□□□□□ -0.28
VGLL1Q99990 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms