Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK1Q99986 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK1Q99986 VENTXP7-201ENST00000475503 772 ntBASIC15.53■□□□□ 0.08
VRK1Q99986 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK1Q99986 AC074051.2-201ENST00000565115 352 ntBASIC15.53■□□□□ 0.08
VRK1Q99986 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK1Q99986 AC008687.5-201ENST00000593746 558 ntBASIC15.53■□□□□ 0.08
VRK1Q99986 LINC01711-201ENST00000598340 967 ntBASIC15.53■□□□□ 0.08
VRK1Q99986 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 AL499627.1-201ENST00000569373 2188 ntBASIC15.53■□□□□ 0.08
VRK1Q99986 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.53■□□□□ 0.08
VRK1Q99986 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
VRK1Q99986 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.53■□□□□ 0.08
VRK1Q99986 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.53■□□□□ 0.08
VRK1Q99986 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VRK1Q99986 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK1Q99986 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
VRK1Q99986 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
VRK1Q99986 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.52■□□□□ 0.08
VRK1Q99986 LINC00167-201ENST00000530583 1419 ntBASIC15.52■□□□□ 0.08
VRK1Q99986 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
VRK1Q99986 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
VRK1Q99986 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
VRK1Q99986 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.52■□□□□ 0.08
VRK1Q99986 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.52■□□□□ 0.08
VRK1Q99986 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.52■□□□□ 0.08
VRK1Q99986 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.52■□□□□ 0.08
VRK1Q99986 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.52■□□□□ 0.08
VRK1Q99986 AC012615.1-201ENST00000565797 1299 ntBASIC15.52■□□□□ 0.08
VRK1Q99986 AC111152.3-201ENST00000569699 673 ntBASIC15.52■□□□□ 0.08
VRK1Q99986 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.52■□□□□ 0.08
VRK1Q99986 Z69720.1-201ENST00000601483 472 ntBASIC15.52■□□□□ 0.08
VRK1Q99986 AL592071.1-201ENST00000611956 408 ntBASIC15.52■□□□□ 0.08
VRK1Q99986 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
VRK1Q99986 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VRK1Q99986 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.52■□□□□ 0.07
VRK1Q99986 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
VRK1Q99986 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.52■□□□□ 0.07
VRK1Q99986 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
VRK1Q99986 AC108860.2-201ENST00000562760 2183 ntBASIC15.52■□□□□ 0.07
VRK1Q99986 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
VRK1Q99986 AC008894.3-201ENST00000624324 3103 ntBASIC15.52■□□□□ 0.07
VRK1Q99986 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.52■□□□□ 0.07
VRK1Q99986 KRT89P-201ENST00000620027 1478 ntBASIC15.52■□□□□ 0.07
VRK1Q99986 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VRK1Q99986 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 PKD1P5-201ENST00000532415 10291 ntBASIC15.51■□□□□ 0.07
VRK1Q99986 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
VRK1Q99986 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.51■□□□□ 0.07
VRK1Q99986 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.51■□□□□ 0.07
VRK1Q99986 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.51■□□□□ 0.07
VRK1Q99986 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.51■□□□□ 0.07
VRK1Q99986 NUS1P1-201ENST00000446295 882 ntBASIC15.51■□□□□ 0.07
VRK1Q99986 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.51■□□□□ 0.07
VRK1Q99986 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.51■□□□□ 0.07
VRK1Q99986 FOSL1P1-201ENST00000511041 816 ntBASIC15.51■□□□□ 0.07
VRK1Q99986 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.51■□□□□ 0.07
VRK1Q99986 AC011840.4-201ENST00000578471 627 ntBASIC15.51■□□□□ 0.07
VRK1Q99986 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 AC004263.2-201ENST00000617183 678 ntBASIC15.51■□□□□ 0.07
VRK1Q99986 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
VRK1Q99986 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.51■□□□□ 0.07
VRK1Q99986 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
VRK1Q99986 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VRK1Q99986 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms